PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM97738.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

SRS

Protein Properties

Length: 231aa MW: 25480 Da PI: 8.9377

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM97738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	127.8	1.2e-39	109	185	3	78
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrel 78 s +++CqdCGnqakkdC h RCRtCCksrgf+C+thvkstWvpaakrrerqqqlaa+++++++ + + +++kr re+ PIM97738.1 109 SEGMNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAALQQNQQNLTiRGDTPKRLREN 185 6789****************************************************998887655577777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MSGFFSLGGK DQEQDHHQQT ETNNSLFLFK NEEIYNKGFE LWQQYYQLHQ QRHQSQNNLN 60 IQDVDFSVGP SGSNRRNNNV IGGGGDESSN YSYRSAAGFK VVRQGRGGSE GMNCQDCGNQ 120 AKKDCPHLRC RTCCKSRGFQ CQTHVKSTWV PAAKRRERQQ QLAALQQNQQ NLTIRGDTPK 180 RLRENPAGGG SVAGGGGGGG GDSALACTTS RLPATTSGDV VVFDKNRIWE F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75520.1	3e-39	SRS family protein