PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM97287.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family M-type_MADS
Protein Properties Length: 61aa    MW: 7027.12 Da    PI: 10.9786
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM97287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.92.7e-28959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                kr en s rq tfskRrng+l KA+ELSvLCdaeva+iifs++g+lye+ss
  PIM97287.1  9 KRAENASSRQETFSKRRNGLLRKAYELSVLCDAEVALIIFSQKGRLYEFSS 59
                789**********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 61 aa     Download sequence    
MVRARAQMKR AENASSRQET FSKRRNGLLR KAYELSVLCD AEVALIIFSQ KGRLYEFSSS  60
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.17e-31MIKC_MADS family protein