PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM97266.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | WRKY | ||||||||
Protein Properties | Length: 138aa MW: 16138.2 Da PI: 10.0093 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99 | 3e-31 | 58 | 116 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG+K+vk+s++pr+Y++C+s gC+vkk+ver++edp++v++tY+g Hnhe PIM97266.1 58 MDDGYKWRKYGKKMVKNSPNPRNYFKCSSGGCNVKKRVEREREDPSYVITTYQGMHNHE 116 69********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MRPENKNLSK NMTNSFDGFS SSAPSTRNIK PSRRELKKYK VEEEYRFAFR TKTDLEFMDD 60 GYKWRKYGKK MVKNSPNPRN YFKCSSGGCN VKKRVERERE DPSYVITTYQ GMHNHESPNC 120 VLYCSPQPSS LSYTSSSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 4e-38 | WRKY family protein |