PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021692668.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 948aa    MW: 104725 Da    PI: 5.1567
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021692668.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.71.2e-24156257199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        ++++ + ++l+++d++ ++W++++iyr++++r++lt+GW+ Fv +++Lk+gD+v+F   +++
  XP_021692668.1 156 FCKTLTASDTSTHGGFSVPRRAAEKLfppldytMQPP-T-QELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVGSKRLKAGDSVLFI--RDE 246
                     99*********************999*****954444.4.38************************************************..457 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+v+v+r+
  XP_021692668.1 247 KSQLLVGVRRA 257
                     7778*****97 PP
2Auxin_resp117.31.3e-38282365183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+++s+F+++YnPra++seFv++++k++k+++ ++vsvGmRf m+fete+s +rr++Gt+vg+sd+dp+rWp+SkWr+L+
  XP_021692668.1 282 AAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYgTQVSVGMRFGMMFETEESGKRRYMGTIVGISDFDPLRWPGSKWRNLQ 365
                     79**********************************9*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 948 aa     Download sequence    
MHFKEKHMMM GSVEEKIKTA GLVGGVQTNL LEEMKLLKEI KDHSGTRKSI NSELWYACAG  60
PLVSLPQVGS LVYYFPQGHS EQVAVSTKRT ATSQIPNYPN LPSQLLCQVH NVALHADKDT  120
DEIYAQMSLQ PVNSEKDVFP IPDFGLKPNK HPSEFFCKTL TASDTSTHGG FSVPRRAAEK  180
LFPPLDYTMQ PPTQELVVRD LHDNTWTFRH IYRGQPKRHL LTTGWSVFVG SKRLKAGDSV  240
LFIRDEKSQL LVGVRRANRQ QTTLPSSVLS ADSMHIGVLA AAAHAAANRS PFTIFYNPRA  300
CPSEFVIPLA KYRKSVYGTQ VSVGMRFGMM FETEESGKRR YMGTIVGISD FDPLRWPGSK  360
WRNLQVEWDE PGCSDKQNRV SSWEIETPES LFIFPSLTSG LKRPLHSGFI GGETEWGNLI  420
KRPLVWLPGN GNGNFSYSSI PNLSSERLFK MLMKPQEVNH QICESAQQEV SAAKVPSLDD  480
VKTMQGIVNQ MPQLNQSVVM SVGNQNYSQF CSNQSDVPGE LHPPCDVENQ TSDGVSIERL  540
KSELDHSTDQ LSQVTSIGEC NEEKSSSSPT NLQNYNNQLQ FQNQNQAQLH AQSSLWPAQP  600
LLEPPVLHPQ QIIMPQADSN TLNGSLPFLD TDYEWISNPS SCTPLPGVFG SPGSLSIFGL  660
QEQSAILSDA INPSIPLMNQ DLWDQQLSNL RYLSPASQLI PSAQQEPCSL NSRGGKDLSD  720
ESNNQSGIYG SLNIDVGNGG SAVIGPSVSN AILDEFCTSK VHDFQNPSDC LVANFSSSQD  780
LQSQITSASL ADSQAFSQQD FPDSSGGTSS SNVDFEKGNY MQNNSWQQVA PRVRTYTKVQ  840
KAGSVGRSID VSSFKNYEEL CSAIECMFGL EGLLNNPRES GWKLVYVDYE NDVLLIGDDP  900
WEEFVGCVRC IRILSPSEVQ QMSEEGMKLL NNANIQGLAS SITEGSRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein