PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021692164.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | AP2 | ||||||||
Protein Properties | Length: 182aa MW: 20722.6 Da PI: 8.3316 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.1 | 7.7e-12 | 25 | 71 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 s+y+GV+ +k grW+A+ + +k+++lg +++ eAa+a+++a+ XP_021692164.1 25 SKYRGVSLHK-CGRWEARMGQF--L-GKKYIYLGLLDSEVEAARAYDRAAI 71 89********.7******5553..2.26**********99*********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MKNLTKEEFV HILRRQSTGF SRGSSKYRGV SLHKCGRWEA RMGQFLGKKY IYLGLLDSEV 60 EAARAYDRAA IICDGRDAVT NFDRITYEGE MFEARNEGGG IDLGMKFSHP LGNGHRGNEE 120 HLQSHSGSYN VQNGGSMVFD LKKLIFLFEC FHFLILENFS FCFNFNVSLM LTFSVISSLF 180 SK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 5e-53 | AP2 family protein |