PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021691847.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 502aa MW: 54102.2 Da PI: 9.1376

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021691847.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.4	2.5e-05	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_021691847.1 6 FICEVCNKGFQREQNLQLHRRGH 28 89*******************88 PP
2	zf-C2H2	13.4	0.00023	82	104	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_021691847.1 82 WKCEKCSKRYAVQSDWKAHSKTC 104 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLKQKTTK EVKRKVYLCP EPTCVHHDPS 60 RALGDLTGIK KHYSRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYR CDCGTLFSRR 120 DSFITHRAFC DALAQESARH PTSLSTIGTH LYGNNHMCLG LSQVGSQIPP LQDQNHPTSK 180 MLRLGSAGAA KFEHIIPPSN SSSAFFMSDA NQVSFPNKSL HGLMQLPDLQ STTNNSSSTN 240 LFNLGYFSNN AAAPNRMSNS DNANSSTTTT NLVNYRFLNP NPFNNGNGGQ GMTTLFDNNM 300 GDHVGSAGIP SLYSNSMQQE NITPHMSATA LLQKAAQMGS TTSSNNSNLL RALGGSPSTG 360 TKSDRPPLVS TNNFGSNSFG NATVGEGGLG AQMESDNQLQ GLMNSLANGG SSFFGGGPGQ 420 DNGFGGFTSS GISLEQPHNS TNFSNVEEAN LHQTLGVGSD KLTLDFLGVG GMVRSIGGGQ 480 HGINLSPVDT EIKSAQAINK PF

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLKQKTTK EVKRKVYLCP EPTCVHHDPS  60
RALGDLTGIK KHYSRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYR CDCGTLFSRR  120
DSFITHRAFC DALAQESARH PTSLSTIGTH LYGNNHMCLG LSQVGSQIPP LQDQNHPTSK  180
MLRLGSAGAA KFEHIIPPSN SSSAFFMSDA NQVSFPNKSL HGLMQLPDLQ STTNNSSSTN  240
LFNLGYFSNN AAAPNRMSNS DNANSSTTTT NLVNYRFLNP NPFNNGNGGQ GMTTLFDNNM  300
GDHVGSAGIP SLYSNSMQQE NITPHMSATA LLQKAAQMGS TTSSNNSNLL RALGGSPSTG  360
TKSDRPPLVS TNNFGSNSFG NATVGEGGLG AQMESDNQLQ GLMNSLANGG SSFFGGGPGQ  420
DNGFGGFTSS GISLEQPHNS TNFSNVEEAN LHQTLGVGSD KLTLDFLGVG GMVRSIGGGQ  480
HGINLSPVDT EIKSAQAINK PF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-105	C2H2 family protein