PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021691754.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 476aa MW: 53761.6 Da PI: 5.9045

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021691754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.2	2.9e-13	306	351	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+r+N++f Lr+ +P+ K++Ka+ L Av YIk+L XP_021691754.1 306 NHVEAERQRRERLNHRFYALRSAVPNV-----SKMDKASLLADAVTYIKEL 351 799*********************6.....5**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MQKISMDELT SPSSSSSFMS FCQDSYPPLQ QRLQFILQSR PEWWVYAIFW QASKDATGRL 60 VLSWGDGHFR GTEEFAAKAC CKQNQLKFGF NLERKMTNKE SQTLFSDDME MDRLADVDAI 120 DYEWFYTVSV TRSFAVEDGI LGKTFGSWAF IWLTGNHELQ MYECERVKEA RMHGVQTLVC 180 ISTTCGVVEL GSSNTIDKDW SLVQLCKSLF GGDTACLVSK EPSHESQIQI PNTCLLDIGT 240 FSASQKETFT QKQNEDDKNK KDATGQGRSS SDSARSDSDG NFTAGNTDRF KKRGRKQLNG 300 EELPINHVEA ERQRRERLNH RFYALRSAVP NVSKMDKASL LADAVTYIKE LKATVDELQS 360 KLEAVSKKSK STNVTDNQST DSMIDHMRSS SSYKAKGMEL DVTIVGSEAM IRFLSPDVNY 420 PAARLMDVLR EVEFKVHHAS MSSIKEMVLQ DVVVRVPDGL TDEEVVRSAI LQRMQN

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MQKISMDELT SPSSSSSFMS FCQDSYPPLQ QRLQFILQSR PEWWVYAIFW QASKDATGRL  60
VLSWGDGHFR GTEEFAAKAC CKQNQLKFGF NLERKMTNKE SQTLFSDDME MDRLADVDAI  120
DYEWFYTVSV TRSFAVEDGI LGKTFGSWAF IWLTGNHELQ MYECERVKEA RMHGVQTLVC  180
ISTTCGVVEL GSSNTIDKDW SLVQLCKSLF GGDTACLVSK EPSHESQIQI PNTCLLDIGT  240
FSASQKETFT QKQNEDDKNK KDATGQGRSS SDSARSDSDG NFTAGNTDRF KKRGRKQLNG  300
EELPINHVEA ERQRRERLNH RFYALRSAVP NVSKMDKASL LADAVTYIKE LKATVDELQS  360
KLEAVSKKSK STNVTDNQST DSMIDHMRSS SSYKAKGMEL DVTIVGSEAM IRFLSPDVNY  420
PAARLMDVLR EVEFKVHHAS MSSIKEMVLQ DVVVRVPDGL TDEEVVRSAI LQRMQN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	312	317	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	1e-56	bHLH family protein