PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021691168.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 380aa MW: 43292.9 Da PI: 5.9302

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021691168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43	8.1e-14	189	240	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++++L+ XP_021691168.1 189 QRMTHIAVERNRRRQMNDHLSSLRSLMPPS---YVQRGDQASIIGGAIDFVRELE 240 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MERRKGPIDP CFLGKHLDVE GLERGYANTE SLRFEEPQFL MPSLEDKMPF LQMLQSVESP 60 PFFPFKGPWD INAYITETDT QIQALELESC VTHDIADLHS PVKSETKGLQ NPHSDSCLED 120 VSPESNQRQA NSIGCFCKEQ NSVSSFPWTY PQTMLNETHF SKSSLVVPRE RRKRKRTRPT 180 KNKEEVENQR MTHIAVERNR RRQMNDHLSS LRSLMPPSYV QRGDQASIIG GAIDFVRELE 240 QLLQSLEAQK RMRKTEAAAT SMGISSNGLF TPQAECNFPR DGSNCEEEVK RKSEAAEIEV 300 TATRNHVNLK IQCERRTGQL LRAIVALEDL RLIVLRLNIT SSETTVLYSF DLKREDNCKL 360 ESADEIAATV DQIFSIINGN

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MERRKGPIDP CFLGKHLDVE GLERGYANTE SLRFEEPQFL MPSLEDKMPF LQMLQSVESP  60
PFFPFKGPWD INAYITETDT QIQALELESC VTHDIADLHS PVKSETKGLQ NPHSDSCLED  120
VSPESNQRQA NSIGCFCKEQ NSVSSFPWTY PQTMLNETHF SKSSLVVPRE RRKRKRTRPT  180
KNKEEVENQR MTHIAVERNR RRQMNDHLSS LRSLMPPSYV QRGDQASIIG GAIDFVRELE  240
QLLQSLEAQK RMRKTEAAAT SMGISSNGLF TPQAECNFPR DGSNCEEEVK RKSEAAEIEV  300
TATRNHVNLK IQCERRTGQL LRAIVALEDL RLIVLRLNIT SSETTVLYSF DLKREDNCKL  360
ESADEIAATV DQIFSIINGN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	176	RRKRKR
2	190	201	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	1e-64	bHLH family protein