PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690263.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 517aa MW: 57175.6 Da PI: 5.5158

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690263.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.5e-17	25	72	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l+++vk++G g+W+++ + g+ R++k+c++rw ++l XP_021690263.1 25 KGPWTAAEDAILIEYVKKHGEGNWNSVQKNSGLMRCGKSCRLRWANHL 72 79******************************************9986 PP
2	Myb_DNA-binding	50.5	4.7e-16	78	121	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ ++++++++lG++ W++ a+ ++ gRt++++k++w++ XP_021690263.1 78 KGSFTPEEERIIIELHAKLGNK-WARMASQLP-GRTDNEIKNFWNT 121 799*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MISNGEAAME AALTVQKAAS QGLKKGPWTA AEDAILIEYV KKHGEGNWNS VQKNSGLMRC 60 GKSCRLRWAN HLRPNLKKGS FTPEEERIII ELHAKLGNKW ARMASQLPGR TDNEIKNFWN 120 TRMKRRQRAG LPVYPQEYQE ETTAFRMQHH HQHQEEQKHP NNNPSSSSFS SLLSSSRKAS 180 YNPSLTLLDP INFSPALDPL HNNLTPFYSN PALQFKSFPD NNTNNSGLAL PMSPYGRLPS 240 SITVFNQTFP ARAIPMTPPS LHYNTADFET NMSFTSLIMG AQVEPVDPIP GLKSELSSGQ 300 TPPRPNTPFS SNTRGGICVR EESSKNTDND SETAVPEMMH DNSNSGLLDA LLLESQNLSR 360 KEKLIGENSV ASDHKGKRVV DEPTEEEEKM EKEAAKRVKL SSINGGEASG ENNCCDDLSS 420 SQSSIGMKPS EEPMDEMNSM DDDLLSLLDN FPTSTPLPEW YRSTNIANGL SSSPAGEGRR 480 IEVEQEASLA RGTTADETPN VEWAFGSSYW NNMPGIC

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MISNGEAAME AALTVQKAAS QGLKKGPWTA AEDAILIEYV KKHGEGNWNS VQKNSGLMRC  60
GKSCRLRWAN HLRPNLKKGS FTPEEERIII ELHAKLGNKW ARMASQLPGR TDNEIKNFWN  120
TRMKRRQRAG LPVYPQEYQE ETTAFRMQHH HQHQEEQKHP NNNPSSSSFS SLLSSSRKAS  180
YNPSLTLLDP INFSPALDPL HNNLTPFYSN PALQFKSFPD NNTNNSGLAL PMSPYGRLPS  240
SITVFNQTFP ARAIPMTPPS LHYNTADFET NMSFTSLIMG AQVEPVDPIP GLKSELSSGQ  300
TPPRPNTPFS SNTRGGICVR EESSKNTDND SETAVPEMMH DNSNSGLLDA LLLESQNLSR  360
KEKLIGENSV ASDHKGKRVV DEPTEEEEKM EKEAAKRVKL SSINGGEASG ENNCCDDLSS  420
SQSSIGMKPS EEPMDEMNSM DDDLLSLLDN FPTSTPLPEW YRSTNIANGL SSSPAGEGRR  480
IEVEQEASLA RGTTADETPN VEWAFGSSYW NNMPGIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	7e-85	MYB family protein