PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690035.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 709aa MW: 79098.5 Da PI: 7.4394

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690035.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.5e-05	77	99	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 kC++C++ F ++ n++rHir+ H XP_021690035.1 77 KCEKCSREFCSSINYRRHIRVqH 99 7*******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 709 aa Download sequence
MPVAKLKASN NTDVMKTEDG NDSLDTFIRQ AIGKEPFLSF SRPGDSPVQW IQLLHALDQQ 60 DLPGWPLLTP LKVQMQKCEK CSREFCSSIN YRRHIRVQHR LKKLDKGSSK NRDLLGTFWD 120 KLSEDEAKEI LSFKDVTLEE VPGSSIIKSM MALIRKPGFS SLPQHCLRAG SALLDIIQAR 180 PSRFPLPSEE LFSILDDASE KTFLCGSGTA VSMQKYIFDG EAGKIGLETK NLVACTSFLV 240 EQKLVKAWLA DKDAEALRCQ QLLVEEEEAA QRRQAELLEK KRQKKLRQKE QKAKEQRQEE 300 QADLKEWIDD TVETVSSTEQ FPLIPSDSSV NGLEALPDHV PSSFEPFQLP SMDEDVDLEI 360 QTGSGSDPGT SHNVERQAIQ RNGRRHSASR WLLSPKSQWN YVPNGFHASL NSQAPKLGGM 420 QKHGNHRDSK PVHSINGNRK WSRKPKPDYL VDSLKTRAQK EAISLPDHNK KHEVLIGSIS 480 VTLGNCSQHE VHNFDGARDD FLSEHQMPKK NNVYDKHNRP DSSHSSTNRS TIKLWRPVSR 540 NGTKDLILVE NGAREFQVDG IADKGDDHTP AEGNCLSSCS VDDNNGITGN SFPLLLEILH 600 PGSLQFSCQA AKAFLAERWK EAIAAEHVKL VLCPDLESSE CMEIKNDCLI GVAGSSDIKK 660 CGLLGNVENQ LVDVGVHESS ITGASKAKIR TKSEKGVKLK YIPKQKTIS

Sequence ? help Back to Top

Protein Sequence Length: 709 aa Download sequence

MPVAKLKASN NTDVMKTEDG NDSLDTFIRQ AIGKEPFLSF SRPGDSPVQW IQLLHALDQQ  60
DLPGWPLLTP LKVQMQKCEK CSREFCSSIN YRRHIRVQHR LKKLDKGSSK NRDLLGTFWD  120
KLSEDEAKEI LSFKDVTLEE VPGSSIIKSM MALIRKPGFS SLPQHCLRAG SALLDIIQAR  180
PSRFPLPSEE LFSILDDASE KTFLCGSGTA VSMQKYIFDG EAGKIGLETK NLVACTSFLV  240
EQKLVKAWLA DKDAEALRCQ QLLVEEEEAA QRRQAELLEK KRQKKLRQKE QKAKEQRQEE  300
QADLKEWIDD TVETVSSTEQ FPLIPSDSSV NGLEALPDHV PSSFEPFQLP SMDEDVDLEI  360
QTGSGSDPGT SHNVERQAIQ RNGRRHSASR WLLSPKSQWN YVPNGFHASL NSQAPKLGGM  420
QKHGNHRDSK PVHSINGNRK WSRKPKPDYL VDSLKTRAQK EAISLPDHNK KHEVLIGSIS  480
VTLGNCSQHE VHNFDGARDD FLSEHQMPKK NNVYDKHNRP DSSHSSTNRS TIKLWRPVSR  540
NGTKDLILVE NGAREFQVDG IADKGDDHTP AEGNCLSSCS VDDNNGITGN SFPLLLEILH  600
PGSLQFSCQA AKAFLAERWK EAIAAEHVKL VLCPDLESSE CMEIKNDCLI GVAGSSDIKK  660
CGLLGNVENQ LVDVGVHESS ITGASKAKIR TKSEKGVKLK YIPKQKTIS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	279	286	EKKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-150	C2H2 family protein