PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021689590.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 422aa MW: 48515.9 Da PI: 5.578

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021689590.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.8	2.4e-35	15	105	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+ye+++d+ +++++sws++g sfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+k++ ++ weF++++F +g+++ll++ XP_021689590.1 15 FLIKTYEMIDDPLTNSVVSWSQSGCSFVVWNPPEFAQDLLPKYFKHNNFSSFVRQLNTYGFRKIDPDQ---------WEFANEEFIRGQRHLLSN 100 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_021689590.1 101 IRRRK 105 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MDSSQGSSSN APAPFLIKTY EMIDDPLTNS VVSWSQSGCS FVVWNPPEFA QDLLPKYFKH 60 NNFSSFVRQL NTYGFRKIDP DQWEFANEEF IRGQRHLLSN IRRRKPIHSH SMQNQVNNSP 120 MTETEKREYE EKINRLKHEK SLLQLELQRH ESEKQAFGCQ IMSLGERLQG LERRQIQLVS 180 FLAQIAKKPG FASIFMQQSE YHSKKRRLIE HDPFNVDHDM EEKESLHFLK DSKSNFELVE 240 KLDSSIKCIE DFFYGAGEAF TQDMQDFALA SQPSPIIFRE PNASSIDGET YSPRSYQSSL 300 HSMDLPSSPE LPICIDHINS PKTPPQSPQF DVNCKPTGSA PVVEAVKESE SELETTNSST 360 PTGGANDHFW EYFLTEAPGS TSTQELDPGF HRRTSDERRW WNANTINDLT KHMEHLAPTE 420 RT

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MDSSQGSSSN APAPFLIKTY EMIDDPLTNS VVSWSQSGCS FVVWNPPEFA QDLLPKYFKH  60
NNFSSFVRQL NTYGFRKIDP DQWEFANEEF IRGQRHLLSN IRRRKPIHSH SMQNQVNNSP  120
MTETEKREYE EKINRLKHEK SLLQLELQRH ESEKQAFGCQ IMSLGERLQG LERRQIQLVS  180
FLAQIAKKPG FASIFMQQSE YHSKKRRLIE HDPFNVDHDM EEKESLHFLK DSKSNFELVE  240
KLDSSIKCIE DFFYGAGEAF TQDMQDFALA SQPSPIIFRE PNASSIDGET YSPRSYQSSL  300
HSMDLPSSPE LPICIDHINS PKTPPQSPQF DVNCKPTGSA PVVEAVKESE SELETTNSST  360
PTGGANDHFW EYFLTEAPGS TSTQELDPGF HRRTSDERRW WNANTINDLT KHMEHLAPTE  420
RT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	6e-84	HSF family protein