PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021689576.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 616aa    MW: 66921.3 Da    PI: 5.0917
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021689576.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS457.48.6e-1402496111374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++Ll+cAeav++++l+la+al++++  la++++++m+++a+yf+eALa+r+++    +y   ++ + s    s++l +   f+e++P+lkf+h
  XP_021689576.1 249 LVHTLLACAEAVQQENLKLAEALVKHIGLLAASQASAMRKVATYFAEALARRIYK----IY-PQKCLDPS---YSDTLEM--HFYETCPYLKFAH 333
                     689****************************************************....44.22333333...4555444..5************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIlea+ +++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae++gv+fef+ +va++l+dl+
  XP_021689576.1 334 FTANQAILEAFTTASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPNNTDALQQVGWKLAQLAETIGVEFEFRGFVANSLADLQ 428
                     *********************************************************************************************** PP

            GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +e+L+++p   E++aVn+v++lhrll++++ ++     vL+ +k ++Pk+v++veqea+hn++ F++rf+eal+yys+lfdsle +  +  +++i
  XP_021689576.1 429 PEMLDLRPpeVETVAVNSVFELHRLLARPGGIDR----VLSSIKAMKPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGSGLAVPSQDI 519
                     ********9999**************88888777....*********************************************777555668899 PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +++ +lgr+i+nvvac ga+r+erhetl++Wr r+e+aGF pv+++++a kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL+++SaW+
  XP_021689576.1 520 IMSELYLGRQICNVVACDGADRVERHETLSHWRTRMESAGFDPVHMGSNAFKQASMLLALFAgGDGYRVEENNGCLMLGWHTRPLIATSAWK 611
                     999999*************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 616 aa     Download sequence    
MKRDHQESCG VVGGTGAYNT NSGDNRGESS SSMGKGKLWE EEQDPGGMDE LLAVLGYKVR  60
SSDMADVAQK LEQLEMVMGT AQEDGISHLS SDTVHYNPSD LSGWVQSMLS ELNPPMGLDA  120
SGMIQNQRDS VLGSSTITSS NPQSHQSIIF SDDSEYDLRA IPGVAAYPRP DSVSERENNR  180
KRIKTSPGPD SGNTLTSNSN STPPLLAASS SSSSFSYSSP ASTITVSGNL SEPSRPVVLI  240
DSQETGVRLV HTLLACAEAV QQENLKLAEA LVKHIGLLAA SQASAMRKVA TYFAEALARR  300
IYKIYPQKCL DPSYSDTLEM HFYETCPYLK FAHFTANQAI LEAFTTASRV HVIDFGLKQG  360
MQWPALMQAL ALRPGGPPAF RLTGIGPPQP NNTDALQQVG WKLAQLAETI GVEFEFRGFV  420
ANSLADLQPE MLDLRPPEVE TVAVNSVFEL HRLLARPGGI DRVLSSIKAM KPKIVTIVEQ  480
EANHNGPVFV DRFTEALHYY SSLFDSLEGS GLAVPSQDII MSELYLGRQI CNVVACDGAD  540
RVERHETLSH WRTRMESAGF DPVHMGSNAF KQASMLLALF AGGDGYRVEE NNGCLMLGWH  600
TRPLIATSAW KLGGSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein