PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021689424.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 240aa MW: 27345.3 Da PI: 6.8685 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.5 | 1e-29 | 16 | 66 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien nrqvtfskRr+g+lKKA+ELSvLCdaevavi+fs+ gkl+e+ss XP_021689424.1 16 KRIENVNNRQVTFSKRRKGLLKKAKELSVLCDAEVAVIVFSNAGKLFEFSS 66 79***********************************************96 PP | |||||||
2 | K-box | 44.2 | 8.1e-16 | 96 | 181 | 15 | 100 |
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ el+ Lk+e++ L+ + +++G++L+ Ls+++L++Le+qL ++l ++ +kK + + ++++++ een++Lrk++ee XP_021689424.1 96 AQRAAELSALKDEVSHLRLSCLQMMGQQLHGLSFNDLRHLERQLSNGLHSVEDKKVQSCXXIKSLDFHQKQKIIEENERLRKQVEE 181 456789****************************************************9988888888889999*********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MTEERKTMGR GKIEIKRIEN VNNRQVTFSK RRKGLLKKAK ELSVLCDAEV AVIVFSNAGK 60 LFEFSSSSME NTLTRYCQSM DLEWLELSHD EHEIEAQRAA ELSALKDEVS HLRLSCLQMM 120 GQQLHGLSFN DLRHLERQLS NGLHSVEDKK VQSCXXIKSL DFHQKQKIIE ENERLRKQVE 180 ELQRTVKTAS YDGGEKEEES DSDISVTSLQ LGLSCDGNKK RKASKSESVC NDSRSQVGSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57390.1 | 4e-52 | MIKC_MADS family protein |