PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687345.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 414aa MW: 45297.1 Da PI: 6.3626

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687345.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.2	4e-10	253	301	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq XP_021687345.1 253 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 301 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MGGNGDNNDG KAFQNGGQSV INCQSSGMSG NPFFAPAWDP VVSMSQHENF GGSSMVSHSE 60 FTNSPYPVVM ENQGNSTTSH LVHYPSDSSY AELMPKFPSY GSGSFSEMVC SFGLTECSQV 120 ANTGCHLNYS SNKEANVERT ITNCVESQED RQLTEEPIIG ATPDGKRRKR VAESNSPFDP 180 NKNAEGERQK DPSGHSSEVQ KEQDEKKPRT EQNTAANLRG KQAAKQAKDN SHSGEAPNEN 240 YIHVRARRGQ ATNSHSLAER VRREKISERM RLLQELVPGC NKITGKAVML DEIINYVQSL 300 QQQVEFLSMK LATVNPELSH DIERILSKDI LHSRGSNAAF MGFSPGTNAH PYSHGIFPAN 360 IPIIPNANPQ FPPVPHAALD HDLQSLFQMG FDSSSAIDSL GANGNLQVMH MHII

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MGGNGDNNDG KAFQNGGQSV INCQSSGMSG NPFFAPAWDP VVSMSQHENF GGSSMVSHSE  60
FTNSPYPVVM ENQGNSTTSH LVHYPSDSSY AELMPKFPSY GSGSFSEMVC SFGLTECSQV  120
ANTGCHLNYS SNKEANVERT ITNCVESQED RQLTEEPIIG ATPDGKRRKR VAESNSPFDP  180
NKNAEGERQK DPSGHSSEVQ KEQDEKKPRT EQNTAANLRG KQAAKQAKDN SHSGEAPNEN  240
YIHVRARRGQ ATNSHSLAER VRREKISERM RLLQELVPGC NKITGKAVML DEIINYVQSL  300
QQQVEFLSMK LATVNPELSH DIERILSKDI LHSRGSNAAF MGFSPGTNAH PYSHGIFPAN  360
IPIIPNANPQ FPPVPHAALD HDLQSLFQMG FDSSSAIDSL GANGNLQVMH MHII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	9e-80	bHLH family protein