PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021686987.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C2H2 | ||||||||
Protein Properties | Length: 281aa MW: 31349.1 Da PI: 8.4705 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.9 | 0.0015 | 7 | 27 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+++F + + H+r+H XP_021686987.1 7 CKICNRRFANGKAMGGHMRSH 27 *******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence |
MEKNRICKIC NRRFANGKAM GGHMRSHLVK LPLPPKPISS HQAEAPSSKS PSPSLSASSL 60 NYPFSETPMQ SYRSVNHQLS SISKPNFATF QDGESETESP KNATRRRSKR PRKSVEKVAE 120 SVVNVTELTE QVSSISDVAM CLLMLSRDKR TTKEVVDHYM EDEADDEYED ESFGTVRVGS 180 KTKGKYWCDA CKRSFRSYQA LGGHKASHKK IKTHLKGEYE EEEGSRSGRV NDNNGGVVGI 240 ERRMFKCPFC DKIFESGQAL AAEDDGEVSQ DELSVVSNPK T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02030.1 | 2e-27 | C2H2 family protein |