PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686337.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 281aa MW: 30301.4 Da PI: 7.0857

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686337.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.3	0.0011	120	142	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H XP_021686337.1 120 YQCKTCNRCFPSFQALGGHRASH 142 9***********99999998887 PP
2	zf-C2H2	13.9	0.00017	187	209	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_021686337.1 187 HECSICGAEFSSGQALGGHMRRH 209 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MDAQQEIVDS IKSKRTKRHR QTSPLMLAFT SSSSSGGDSG PERIDNNISS STSPSTSIEF 60 AESIGGEEED MANCLILLAQ GSLHHQSRKL SEPAAAAAAR ATSTATAAAN KASSGSSYAY 120 QCKTCNRCFP SFQALGGHRA SHKKPGNKAH NEDNKVIEEE EDRQLLNNMS TALSLQMPIN 180 IKSNKVHECS ICGAEFSSGQ ALGGHMRRHR AAFAPSSTTT TTRSLVTNSP ESQESKKPRN 240 SLQLDLNLPA PEDDLRESNF HFASNEQVLV FSASSLVDCH Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	3e-49	C2H2 family protein