PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021686248.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 215aa MW: 24794.7 Da PI: 9.6498 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.1 | 5.7e-29 | 10 | 58 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gkl e++ XP_021686248.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLCEFA 58 8***********************************************8 PP | |||||||
2 | K-box | 83.8 | 3.7e-28 | 79 | 170 | 6 | 97 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++ +++++++l++e++++ k+ie L+ +R+llGe+L+s++++eLqq+eqqLe+s++++R++Kn++++eqie+l++kek l en +L +k XP_021686248.1 79 SRKISDENMQQLKTEATNMVKNIELLEIAKRKLLGECLGSCTIEELQQIEQQLERSVSNVRARKNQVFKEQIERLKEKEKLLAAENARLCEK 170 334899*********************************************************************************99877 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 215 aa Download sequence |
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLCEFANS 60 RMQATIERYR KHVKDTQISR KISDENMQQL KTEATNMVKN IELLEIAKRK LLGECLGSCT 120 IEELQQIEQQ LERSVSNVRA RKNQVFKEQI ERLKEKEKLL AAENARLCEK CGVQPWQSLK 180 VVGETRLCEE SSPVSDVETE LFIGPPETRT QRLLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-80 | MIKC_MADS family protein |