PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021686233.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 233aa MW: 26896.2 Da PI: 9.6905 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.1 | 3e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss XP_021686233.1 9 KRIENAASRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 73.9 | 4.7e-25 | 85 | 173 | 9 | 97 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++++ ++++++ L k+ie L+ ++ +llG++Le++s+ eLqqLe+qLe+sl++iR++Kn+l++e+ie+l++ ek l eenk+L++k XP_021686233.1 85 TSQENLQNMKEDTFSLAKKIELLEVSKLKLLGDGLEPCSIDELQQLESQLERSLTRIRTRKNQLFTEKIEKLREEEKILMEENKRLQAK 173 68899*********************************************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MVRGKTQMKR IENAASRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSC 60 RFFSINKTIE RYQKKAKDLG ISIKTSQENL QNMKEDTFSL AKKIELLEVS KLKLLGDGLE 120 PCSIDELQQL ESQLERSLTR IRTRKNQLFT EKIEKLREEE KILMEENKRL QAKCGLQPMD 180 LSTTTIKEQH VADRQSMEVE TELFIGPQIA NRKNMEVGTE LFIGPPETRT SFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 7e-64 | MIKC_MADS family protein |