PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686045.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 806aa MW: 90289.8 Da PI: 5.7899

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686045.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.1	2e-08	744	798	2	47
SSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 WT E+e l+++v+++ + Wk+I ++ gRt ++k++w++ XP_021686045.1 744 VHWTDKEEEMLKEGVQKFSKTderaiPWKKILEYGSsvflRGRTTVDLKDKWRNM 798 57***************99*********999**************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 806 aa Download sequence
MGDPSISDSS LEWLWTIEYL ASFRQLDPSI LQHLINAAPI LPEHLGKSTR EMVSLRCLEH 60 LFGNSNEVSN DVPSVTEPKH IFDFSGTCED VLKSILKETS VSDLRTSGSD FSKWDIHRFI 120 EHKRASIPKR ALEKLKDAIL KGTHPCAASL TELRGILHKN DENDKITVDS CHHNAVTGRI 180 DIDDTNTQTM APEGSSFSLP VENKNGMVGG DSHHRNLLPF KRNKSYLDDE NPAGEYQEDQ 240 GGVGSGDLLL NVKRFKSNPT ERIFIPRNGK ELVEDSSERM VGVIEKGSCH MERESQVEGP 300 GECRSLENGH DKFVATEGLG RSCNASVSAE IQHNQRENAD NAKKMPSDTS GDGPSQHILM 360 DEVHEAEHIE LNGTCVRTLH KVSIHDAKAN SYCGYQLKSP SAVSLSGFHS DTPVDKLGGM 420 EHVYEEDTSS DGDEHHFSKV DVAMEKNRFL SSQCTLNHVS PTNWTELNLC VKCGKDGQFL 480 VCNAVGCPLV VHKECLGSLP RFDEEGKFYC PFCAYSLAIS EYMEAKKRAS LARKELSAFI 540 NKQTESSHSK EDSKLNHYGD EDPMSGNFGD RESDKTNNGG YALRVNGQLK KRRGDKQPVE 600 PMVSCADAKL MGQEEEPDAT HAMIHVSPGE KEREEMAPEC LRGLDREDQT FANPESSGDN 660 PVSKNNEFFS LNEKQAEGLI QKDVLEQQSG DSFEKPVHAI EINQGDISDE RNEEKITSNC 720 SIRFRRREAQ YVYPAIPQLR RKKVHWTDKE EEMLKEGVQK FSKTDERAIP WKKILEYGSS 780 VFLRGRTTVD LKDKWRNMCK GSPKCK

Sequence ? help Back to Top

Protein Sequence Length: 806 aa Download sequence

MGDPSISDSS LEWLWTIEYL ASFRQLDPSI LQHLINAAPI LPEHLGKSTR EMVSLRCLEH  60
LFGNSNEVSN DVPSVTEPKH IFDFSGTCED VLKSILKETS VSDLRTSGSD FSKWDIHRFI  120
EHKRASIPKR ALEKLKDAIL KGTHPCAASL TELRGILHKN DENDKITVDS CHHNAVTGRI  180
DIDDTNTQTM APEGSSFSLP VENKNGMVGG DSHHRNLLPF KRNKSYLDDE NPAGEYQEDQ  240
GGVGSGDLLL NVKRFKSNPT ERIFIPRNGK ELVEDSSERM VGVIEKGSCH MERESQVEGP  300
GECRSLENGH DKFVATEGLG RSCNASVSAE IQHNQRENAD NAKKMPSDTS GDGPSQHILM  360
DEVHEAEHIE LNGTCVRTLH KVSIHDAKAN SYCGYQLKSP SAVSLSGFHS DTPVDKLGGM  420
EHVYEEDTSS DGDEHHFSKV DVAMEKNRFL SSQCTLNHVS PTNWTELNLC VKCGKDGQFL  480
VCNAVGCPLV VHKECLGSLP RFDEEGKFYC PFCAYSLAIS EYMEAKKRAS LARKELSAFI  540
NKQTESSHSK EDSKLNHYGD EDPMSGNFGD RESDKTNNGG YALRVNGQLK KRRGDKQPVE  600
PMVSCADAKL MGQEEEPDAT HAMIHVSPGE KEREEMAPEC LRGLDREDQT FANPESSGDN  660
PVSKNNEFFS LNEKQAEGLI QKDVLEQQSG DSFEKPVHAI EINQGDISDE RNEEKITSNC  720
SIRFRRREAQ YVYPAIPQLR RKKVHWTDKE EEMLKEGVQK FSKTDERAIP WKKILEYGSS  780
VFLRGRTTVD LKDKWRNMCK GSPKCK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	725	743	RRREAQYVYPAIPQLRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	2e-08	MYB_related family protein