PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683916.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 805aa MW: 90224.8 Da PI: 4.644

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.8	2.9e-09	749	802	1	46
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHT....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmg....kgRtlkqcksrwqk 46 + +WT E+e l+++v+++ + Wk+I ++ g gRt ++k++w++ XP_021683916.1 749 KVPWTVKEEEMLKEGVQKFSNIgeraIWKKILEYGGsvflSGRTTVDLKDKWRN 802 579**************988*****************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 805 aa Download sequence
MGEPSSSDSS LAWLWVIEYL ASFQQLDPSI LHDLIDAAPI LPEDLGKSMR EMVALRCLEQ 60 LFGTSNEVVN DVPSVREPKH TFDFSQTCED VLESILKETS VSDLRTSGPD LLKWDIHPFI 120 THKRASMPKC ALEQLKDAIL EGTRPYAAYL TELSGLVHKN DENDSITVDS CHHNAVTGRV 180 DSDDANAQIM APEGSAISLP LENRNEMVGC DSHHRKLLPL KRNKSDLDNE NPAGEYQEDQ 240 GDVGNDDLHL NVKRFKSDAL CIDISTEQIF IPLNGKELVE DSSERMVGVT EKESCHMERE 300 SLGVLGECRS LENGHDKFVA TEELGRSLNA DVSAEFQHNQ CENVDNANQM PSDTSGDGPC 360 QYILVDEVNE AEPRALNDMS VRTRHKVSID DTKANSYCGN QLKSPSVISL TGLRRDTTVE 420 KVGMEHFYEE DPSCDGDEYD QEKFDVAMEK SHFLSSLCTL IHVSPTDWTE RNLCIKCSKD 480 GQLLVCNAVG CPLVVHSGCL GSLPSFDVEG KFYCPFCAYS HAISEYMEVK KKASLARKEL 540 SAFIHKQTES SHSKEHSKSN QYGDEDDMSG NLGRREPYQT NNDGYPLKVN GQLKKGSVDE 600 QQVEPIVSCL HVNLMGREEE PDATHGTINI SPGEKKREEM APECLSVKAL DRQDQICADP 660 KCNGDNPMSE NNEFFSSNEK QAEGGIEKEV LEQQSSDSLE KPVCAIKIDE GDIFDEGNKE 720 NMISNYSIRS RRRERQYVYP AIPQLRRKKV PWTVKEEEML KEGVQKFSNI GERAIWKKIL 780 EYGGSVFLSG RTTVDLKDKW RNICK

Sequence ? help Back to Top

Protein Sequence Length: 805 aa Download sequence

MGEPSSSDSS LAWLWVIEYL ASFQQLDPSI LHDLIDAAPI LPEDLGKSMR EMVALRCLEQ  60
LFGTSNEVVN DVPSVREPKH TFDFSQTCED VLESILKETS VSDLRTSGPD LLKWDIHPFI  120
THKRASMPKC ALEQLKDAIL EGTRPYAAYL TELSGLVHKN DENDSITVDS CHHNAVTGRV  180
DSDDANAQIM APEGSAISLP LENRNEMVGC DSHHRKLLPL KRNKSDLDNE NPAGEYQEDQ  240
GDVGNDDLHL NVKRFKSDAL CIDISTEQIF IPLNGKELVE DSSERMVGVT EKESCHMERE  300
SLGVLGECRS LENGHDKFVA TEELGRSLNA DVSAEFQHNQ CENVDNANQM PSDTSGDGPC  360
QYILVDEVNE AEPRALNDMS VRTRHKVSID DTKANSYCGN QLKSPSVISL TGLRRDTTVE  420
KVGMEHFYEE DPSCDGDEYD QEKFDVAMEK SHFLSSLCTL IHVSPTDWTE RNLCIKCSKD  480
GQLLVCNAVG CPLVVHSGCL GSLPSFDVEG KFYCPFCAYS HAISEYMEVK KKASLARKEL  540
SAFIHKQTES SHSKEHSKSN QYGDEDDMSG NLGRREPYQT NNDGYPLKVN GQLKKGSVDE  600
QQVEPIVSCL HVNLMGREEE PDATHGTINI SPGEKKREEM APECLSVKAL DRQDQICADP  660
KCNGDNPMSE NNEFFSSNEK QAEGGIEKEV LEQQSSDSLE KPVCAIKIDE GDIFDEGNKE  720
NMISNYSIRS RRRERQYVYP AIPQLRRKKV PWTVKEEEML KEGVQKFSNI GERAIWKKIL  780
EYGGSVFLSG RTTVDLKDKW RNICK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	731	749	RRRERQYVYPAIPQLRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	9e-07	MYB_related family protein