PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683403.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 362aa MW: 42078.5 Da PI: 6.3756

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683403.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.7	2.2e-18	35	114	13	98
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++l +p +f+++ k+ ++ +tl+ +sg +W+v l + +++++++ GW+eFv+++ L+e+D ++Fk++g+s+f v +f+ XP_021683403.1 35 RRQLPIPEHFTKNLR--KKLPQVMTLRGPSGLTWQVVL--TTNDDTMFFNHGWEEFVNDHFLQEKDLLIFKYNGDSCF--DVLIFD 114 34699***96655..448889***********..9***********************************..888887 PP
2	B3	47.9	2.4e-15	260	341	1	84
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f v++p +v ++ +++p ++++ ++ e+++++l++ + ++W k+ y+k++++ l++GWk+F+ an+L+e D++vF+ XP_021683403.1 260 FMVVMKPTHVYRRFYMSIPSAWTSKNlrSL---EKQDVILRT-KENTWHTKFYYQKSKNSGGLSSGWKSFALANDLQEFDVCVFEP 341 77899****************9996433...344788776.899**9999999999********************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MGEEACRDCR SWEEEIYWTH FQCLHFSQVL RPSFRRQLPI PEHFTKNLRK KLPQVMTLRG 60 PSGLTWQVVL TTNDDTMFFN HGWEEFVNDH FLQEKDLLIF KYNGDSCFDV LIFDGQSLCE 120 KAGSYFVRKC GHREHDSGYH TKRKTGENSF EAPLPCPEDV VGFSPPQKSA NNDIDTTPLG 180 RPNIYRCTTK KTRREIEFTN PIQEEFSTSD EEIETKPDME HVSPSVVHSV PYLSSRRLIT 240 EEEKQNVCQL AQAVLTRDGF MVVMKPTHVY RRFYMSIPSA WTSKNLRSLE KQDVILRTKE 300 NTWHTKFYYQ KSKNSGGLSS GWKSFALAND LQEFDVCVFE PGSPVNDAIV LDVNIFRVFP 360 ED

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MGEEACRDCR SWEEEIYWTH FQCLHFSQVL RPSFRRQLPI PEHFTKNLRK KLPQVMTLRG  60
PSGLTWQVVL TTNDDTMFFN HGWEEFVNDH FLQEKDLLIF KYNGDSCFDV LIFDGQSLCE  120
KAGSYFVRKC GHREHDSGYH TKRKTGENSF EAPLPCPEDV VGFSPPQKSA NNDIDTTPLG  180
RPNIYRCTTK KTRREIEFTN PIQEEFSTSD EEIETKPDME HVSPSVVHSV PYLSSRRLIT  240
EEEKQNVCQL AQAVLTRDGF MVVMKPTHVY RRFYMSIPSA WTSKNLRSLE KQDVILRTKE  300
NTWHTKFYYQ KSKNSGGLSS GWKSFALAND LQEFDVCVFE PGSPVNDAIV LDVNIFRVFP  360
ED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	2e-85	B3 family protein