PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683282.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 298aa MW: 32990.1 Da PI: 8.4035

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683282.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.1	5.3e-17	135	189	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Le+ F+++++++ +++ +L k+l+L rqV vWFqNrRa+ k XP_021683282.1 135 RKKLRLSKEQSLLLEDTFKEHNTLNPKQKLDLGKQLNLRPRQVEVWFQNRRARTK 189 788899***********************************************98 PP
2	HD-ZIP_I/II	123.5	1e-39	135	224	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+ lLE++F+e+++L+p++K +l ++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL+k+v+eLr +l XP_021683282.1 135 RKKLRLSKEQSLLLEDTFKEHNTLNPKQKLDLGKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTQENRRLQKDVQELR-AL 224 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MGEKDDGLGL GLGLSLGAAA PKNQPSLKLN LMPFPSVFMQ NNHKTSLNDL FQSSDRNSDA 60 RSFQRGIDMN RMPSVADCDD ETGVSSPNST ISSISGKKSE REQIGEETEA ERASCFRGGL 120 VSDDEDGLAG GDASRKKLRL SKEQSLLLED TFKEHNTLNP KQKLDLGKQL NLRPRQVEVW 180 FQNRRARTKL KQTEVDCEYL KRCCENLTQE NRRLQKDVQE LRALKLSPQF YMPTTLTMCP 240 SCERVAVSSS SSSSATTAAP TATCSHTGNP QPQRPVPIKP WAALPIHHRP FDTPASRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	140	SRKKLRL
2	184	192	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60390.1	7e-94	HD-ZIP family protein