PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683079.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 393aa MW: 42298.6 Da PI: 7.863

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683079.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132.8	3.1e-41	78	229	2	114
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s + XP_021683079.1 78 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrsas 172 789******************************************************************99987777777777656655555555 PP TCP 89 ..............................kaaksaa.kskksqksaasalnlakes 114 ++++ +a + k++ +++s l+l+ e+ XP_021683079.1 173 fnpnfsmqqrrslfpgigletsptptflnfQSSNLNAvLQAKQELRDSSSLELSTET 229 566666666666677766655555555555333333334444444444444444433 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MEGGDDQLHH HHHHHRPNFP FQLLEKKEDE PCSSSSPYPS SLPISTAEPN NNNNNTNSSL 60 NRSASSLQIV PEPSKKPPPK RTSTKDRHTK VDGRGRRIRM PALCAARVFQ LTRELGHKSD 120 GETIEWLLQQ AEPAVIAATG TGTIPANFTS LNISLRSSGS SMSVPSQLRS ASFNPNFSMQ 180 QRRSLFPGIG LETSPTPTFL NFQSSNLNAV LQAKQELRDS SSLELSTETE ESLSRKRRPE 240 QDLSSQQHQM GSYLLQSSTG AIPASHTQIP ANFWMLANPN NQVMSGDPIW TFPSVNNSAL 300 YRGTTSSGLH FMNFPAPVAL LPSQQLGSSS IGGGGSGGNS GINEGHLNML AGLNPYRPPG 360 MSESQASGSH SHHCGGGGGG NGDDRHDTTS HNS

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MEGGDDQLHH HHHHHRPNFP FQLLEKKEDE PCSSSSPYPS SLPISTAEPN NNNNNTNSSL  60
NRSASSLQIV PEPSKKPPPK RTSTKDRHTK VDGRGRRIRM PALCAARVFQ LTRELGHKSD  120
GETIEWLLQQ AEPAVIAATG TGTIPANFTS LNISLRSSGS SMSVPSQLRS ASFNPNFSMQ  180
QRRSLFPGIG LETSPTPTFL NFQSSNLNAV LQAKQELRDS SSLELSTETE ESLSRKRRPE  240
QDLSSQQHQM GSYLLQSSTG AIPASHTQIP ANFWMLANPN NQVMSGDPIW TFPSVNNSAL  300
YRGTTSSGLH FMNFPAPVAL LPSQQLGSSS IGGGGSGGNS GINEGHLNML AGLNPYRPPG  360
MSESQASGSH SHHCGGGGGG NGDDRHDTTS HNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	2e-55	TCP family protein