PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021682432.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 912aa    MW: 100363 Da    PI: 4.8939
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021682432.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.43.3e-24149250199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        ++++ + ++l+++d++ ++W++++iyr++++r++lt+GW+ Fv  ++Lk+gD+v+F   +++
  XP_021682432.1 149 FCKTLTASDTSTHGGFSVPRRAAEKLfpaldytMQPP-T-QELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSIFVGTKRLKAGDSVLFI--RDE 239
                     99*********************999*****954444.4.38************************************************..457 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+v+v+r+
  XP_021682432.1 240 KSQLLVGVRRA 250
                     7778*****97 PP
2Auxin_resp117.31.3e-38275358183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+++s+F+++YnPra++seFv++++k++ka++ ++vsvGmRf m+fete+s +rr++Gt+vg+sdldp+rWp SkWr+L+
  XP_021682432.1 275 AAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKAVYgTQVSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPSSKWRNLQ 358
                     79**********************************9*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 912 aa     Download sequence    
MMMGSVEEKI KAGGLVGGIQ TNLLEEMKLL KEIQDHSGTR KTINSELWYA CAGPLVSLPQ  60
VGSLVYYFPQ GHSEQVAVST KRTATSQIPN YPNLPSQLLC QVHNVTLHAD KDTDEIYAQM  120
SLQPVNSEKD VFPIPDFGLK PSKHPTEFFC KTLTASDTST HGGFSVPRRA AEKLFPALDY  180
TMQPPTQELV VRDLHDNTWT FRHIYRGQPK RHLLTTGWSI FVGTKRLKAG DSVLFIRDEK  240
SQLLVGVRRA NRQQTMLPSS VLSADSMHIG VLAAAAHAAA NRSPFTIFYN PRACPSEFVI  300
PLAKYRKAVY GTQVSVGMRF GMMFETEESG KRRYMGTIVG ISDLDPLRWP SSKWRNLQVE  360
WDEPGCSDKQ NRVSSWEIET PESLFIFPSL TSSLKRPLHS GFLGGETEWG NLMKRPLIWN  420
GNGNFPYSSI PNLCSEQLFK MLMKPQVVNH PGAGMYESAL PEVSASKGAS LDDVKAMQGT  480
VNQMPQANQS VAMSVEKQTP DGISIEKINS ELDHSTDQLS QVTSTGECNE DKPPSSRTNL  540
QNCGNQLEFQ NQNQALLHAQ SSLWPVQPLL EPSVMHPQQI NIPQADSNTL NGSLPFQDAD  600
GWISNPPSCI SLPGIYGSSG ALSMFGLQEQ SAILPDPSIP LMNQDLWDQQ LNNLRFLPPA  660
SQLVPLAQQE PCSLNSCGTK DLSDESNDQS GIYGSLNFDV GNGGSAVIDP SVSNAILDDL  720
CTSKDVDFQN PSNCLLGNFN SSQDVQSQIT SASLADSQAF SQQDFPDSSG GTPSSNLDFE  780
KGNYMQNNSW QQVAPRVRTY TKVQKAGSVG RSIDVSSFKN YEEICSAIEC MFGLEGLLNN  840
PRESGWKLVY VDYENDVLLI GDDPWEEFVG CVRCIRILSP SEVQQMSEEG MKLLNNPNIQ  900
GLAASITEGG RA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein