PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021682201.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 206aa MW: 23479.8 Da PI: 6.563 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.4 | 1.9e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n++ rqvtfskRr g++KKA+ELS+LCdae+a+i+fs tgkl+ey+s XP_021682201.1 9 KKIDNNTARQVTFSKRRRGLFKKAYELSTLCDAEIALIVFSATGKLFEYAS 59 68***********************************************86 PP | |||||||
2 | K-box | 41.9 | 4.2e-15 | 92 | 165 | 19 | 92 |
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenk 92 +a L ke+e+ e+R++ Ge+L+ Ls++eLqqLe+ Le++lk++ ++K l+e+ e+l+k++ ++ + + XP_021682201.1 92 GTFAALSKEVEERTLELRQMRGEELQGLSIEELQQLERLLERGLKRVVETKGAQLMEENERLKKQMMDIPVARM 165 567789999999999*************************************************9988766555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MTRQKIQIKK IDNNTARQVT FSKRRRGLFK KAYELSTLCD AEIALIVFSA TGKLFEYASS 60 SVNQVIERHK LHPKNVGNKL DQPSLDQQLE DGTFAALSKE VEERTLELRQ MRGEELQGLS 120 IEELQQLERL LERGLKRVVE TKGAQLMEEN ERLKKQMMDI PVARMQLFEA GQPSDSVMTN 180 TSSSADPAQD FEGSYTFLRL GLPFPD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 4e-67 | MIKC_MADS family protein |