PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021680973.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 521aa    MW: 58008.3 Da    PI: 5.8067
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021680973.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3727.8e-1141495201374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs..elykalppsetseknsseelaalklfsevsPilkf 93 
                     lv+lL++cAeav+ +d++ a+alL++l+  a   g+++qR+a++f+++La rl+  ++  ++  + p+ +  + +s+e+  al+l +e++P ++f
  XP_021680973.1 149 LVQLLIACAEAVACRDKSHASALLSELRRSALVFGSSFQRVASCFVQGLADRLSVVQPlgTVGFTAPMMNIMDVSSDEKEEALCLVYEICPHIQF 243
                     689**************************************************9844411233333444444455999999************** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                     +h++aN+ Ilea+ege+ vH++D++++    +G QW  L+q+LasR+++pp +lRiTgvg        + +++g+ L ++A+ lg+++ef+v v+
  XP_021680973.1 244 GHFVANSSILEAFEGESFVHVVDLGMTlglpHGHQWRQLIQSLASRAGKPPcRLRITGVGL----CVGRFQTIGDELVEYANDLGINLEFTV-VE 333
                     ***********************98873333788*************98888*********....**************************9.7* PP

            GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                     ++le+l+ ++++v  gE+l+Vn++lqlh +++es    +    vL+++  lsPkv+v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lpr 
  XP_021680973.1 334 SNLENLRCDDIKVFDGEVLVVNSILQLHCVVKESRGALN---CVLQIIHALSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPRY 425
                     *******************************88887777...9**************************************************** PP

            GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372
                     +  r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+++p++  +++qak  l k k  dgy+v ee+g++vlgWk +p++++S+
  XP_021680973.1 426 DTRRAKMEQFYFAEEIKNIVSCEGPARVERHEKVDQWRRRMSRAGFQAAPIK--MMAQAKQWLGKNKvCDGYTVVEEKGCMVLGWKFKPIIAASC 518
                     **************************************************96..789**********9*************************** PP

            GRAS 373 Wr 374
                     W+
  XP_021680973.1 519 WK 520
                     *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    
MSPSLSSSEF SEDGTVNRMS GLDLSVSAMA YYPYPYLPTL ENNPFICILP FSEEIRERKR  60
IKRTLSFAES TGSNSDFYCV GGSNSDNSIS RSSSNNSLNS LPRLRFRDHI LTYTQRYLAA  120
EAIEEAATVM TNAEEGGNEE DGSTDGMRLV QLLIACAEAV ACRDKSHASA LLSELRRSAL  180
VFGSSFQRVA SCFVQGLADR LSVVQPLGTV GFTAPMMNIM DVSSDEKEEA LCLVYEICPH  240
IQFGHFVANS SILEAFEGES FVHVVDLGMT LGLPHGHQWR QLIQSLASRA GKPPCRLRIT  300
GVGLCVGRFQ TIGDELVEYA NDLGINLEFT VVESNLENLR CDDIKVFDGE VLVVNSILQL  360
HCVVKESRGA LNCVLQIIHA LSPKVLVLVE QDSSHNGPFF LGRFMEALHY YSAIFDSLDA  420
MLPRYDTRRA KMEQFYFAEE IKNIVSCEGP ARVERHEKVD QWRRRMSRAG FQAAPIKMMA  480
QAKQWLGKNK VCDGYTVVEE KGCMVLGWKF KPIIAASCWK C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.19e-78GRAS family protein