PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021680647.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | ZF-HD | ||||||||
Protein Properties | Length: 349aa MW: 38411.5 Da PI: 9.1163 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 104.4 | 7.4e-33 | 120 | 174 | 2 | 57 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 ++vrY+eCl+NhAa++Gg +vDGCgEfmps geegt++alkCaAC+CHRnFHR+e XP_021680647.1 120 TSVRYRECLRNHAANMGGIVVDGCGEFMPS-GEEGTPEALKCAACECHRNFHRKEI 174 579**************************9.999********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MELRGLEKEM PSSLDYNTPN RDSSCKIPSA SIISAFGATK SDHRHQTVTP QTLEHHLPLN 60 LQHQTLKPAR DPDQTPDPTP APLSLPIAAT RATSPTASRS ISISPPPPPA STAIATASTT 120 SVRYRECLRN HAANMGGIVV DGCGEFMPSG EEGTPEALKC AACECHRNFH RKEIGGEKPQ 180 CAANCYYKNN NQRNTLPLPQ QLATSLLQPQ ASVHQYHGYP HGFSMTPSTA PIAPMMMTFG 240 GGGGSGGTES SSEDINMFQS NLQGARSMQP SSLKKRLRTK FSQEQKDKMM EFAERLGWKI 300 QKQDEQDVQQ FCSRVGLKRK VFKVWMHNNK QSMKKANVST IETLEKHIL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 273 | 279 | LKKRLRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75240.1 | 3e-55 | ZF-HD family protein |