PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021680410.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 366aa MW: 40419.2 Da PI: 10.1129

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021680410.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	47.7	4e-15	72	159	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Li+a e+ +l+rg+lk+++W+ev++ + ++ ++ +qCk++++ ++k+yk +k+ ++ s++p+f++l+ XP_021680410.1 72 CWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVssreDYTKAAKTDIQCKNRIDTVKKKYKLEKAKIAAGS--GPSKWPFFERLD 159 7***********************************84433344566888*****************984..4457****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MDDDEEIQSH TSAATGSPSP SPPNGRITVT VAAAPPSSHL QQQPSQQQNN NNLSLTLPIQ 60 QPKTNGGGRE DCWSEGATAV LIDAWGERYL ELSRGNLKQK HWKEVADIVS SREDYTKAAK 120 TDIQCKNRID TVKKKYKLEK AKIAAGSGPS KWPFFERLDQ LIGPAAKIPV TATAAAASLS 180 SKVPVGIPVG IRSGGASGSN QYQLHQGKAQ MRSNPVTKNQ NVKSQFRKRT QVETESSSEE 240 EENFPDSDDS LPPEKKPRGV QRGVNTKGVK ERKGWGNSIR MLTRAILKFG EAYEQAESVK 300 LQQVVEMEKT RMKFAKELEL QRMQFFMKTQ MEISQLKRGR RGGNGSNHHI SGNNIVHDNN 360 NSDSDN

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MDDDEEIQSH TSAATGSPSP SPPNGRITVT VAAAPPSSHL QQQPSQQQNN NNLSLTLPIQ  60
QPKTNGGGRE DCWSEGATAV LIDAWGERYL ELSRGNLKQK HWKEVADIVS SREDYTKAAK  120
TDIQCKNRID TVKKKYKLEK AKIAAGSGPS KWPFFERLDQ LIGPAAKIPV TATAAAASLS  180
SKVPVGIPVG IRSGGASGSN QYQLHQGKAQ MRSNPVTKNQ NVKSQFRKRT QVETESSSEE  240
EENFPDSDDS LPPEKKPRGV QRGVNTKGVK ERKGWGNSIR MLTRAILKFG EAYEQAESVK  300
LQQVVEMEKT RMKFAKELEL QRMQFFMKTQ MEISQLKRGR RGGNGSNHHI SGNNIVHDNN  360
NSDSDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54060.1	4e-50	Trihelix family protein