PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021679899.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 274aa    MW: 30585.6 Da    PI: 8.7018
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021679899.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.61e-18129183256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tkeq   Lee F+++++++ ++++ LA++l+L  rqV vWFqNrRa+ k
  XP_021679899.1 129 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTK 183
                     788899***********************************************98 PP
2HD-ZIP_I/II125.32.7e-40129218191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rl+keq++lLEesF+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +l
  XP_021679899.1 129 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELK-AL 218
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MGCPDDGCNT GLVLGLGFSS STSLEKPDNN NNHKPKMMYK PCFGPSLSLG LSGEIYNHRG  60
SSKKINDVNK GCEESVGADL LRQASPHSAV SSFSGGRVKR ERDLSSEEIE AERVSSRVSD  120
EDEDATNTRK KLRLTKEQSA LLEESFKQHS TLNPKQKQAL ARQLNLRPRQ VEVWFQNRRA  180
RTKLKQTEVD CEFLKKCCET LTDENRRLQK ELQELKALKL AQPFYMHMPA ATLTMCPSCE  240
RIGGVGDGAS KNNPFSMTPK PHFYNPFTNP SAAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128134TRKKLRL
2178186RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.18e-94HD-ZIP family protein