PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021679170.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 284aa    MW: 31980.4 Da    PI: 5.895
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021679170.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601261.8e-39101101101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     aCaaCk++rrkC+++C+l pyfp +qp+ f+n+hklFG+++++kll++++ ++re+am+s++y+A++r r Pv+G+ g+i +l+ q++q+++el+
  XP_021679170.1  10 ACAACKYQRRKCSSECPLKPYFPPDQPQLFQNAHKLFGVKKITKLLDNIDASQREEAMRSVIYQANVRDRFPVHGCWGIICQLHYQIRQAEEELH 104
                     7********************************************************************************************** PP

          DUF260  96 llkeel 101
                     +++++l
  XP_021679170.1 105 AVHAQL 110
                     **9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MTLKGGTSQA CAACKYQRRK CSSECPLKPY FPPDQPQLFQ NAHKLFGVKK ITKLLDNIDA  60
SQREEAMRSV IYQANVRDRF PVHGCWGIIC QLHYQIRQAE EELHAVHAQL EMYRQHQQHQ  120
ISSLTDDVPS QLQLGMAPPS NALSLFGHTT SQPYNALPVS QQHSYSNSSN PGYSSGYLDS  180
KDQLGNSMWV QHPYATTNNN NTNPMAIQSQ LVASQPLAIQ QEVDYDEIHP FFDTIDDRQS  240
YIDSKEAYES SSEESFKDTT QSIEHVAENE LKSAAACFSL TSVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47870.13e-52LBD family protein