PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678997.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 359aa MW: 40475.8 Da PI: 8.248

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678997.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.8	3.4e-56	16	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++ + + ++i e+d++k+ePwdLpk++k +ekewyfF+ +d+ky+tg r+nrat++gyWkatgkdke+++ XP_021678997.1 16 LPPGFRFHPTDEELITHYLSPKVLDNCFCA-RAIGEADLNKCEPWDLPKRAKMGEKEWYFFCVKDRKYPTGLRTNRATDAGYWKATGKDKEIYR- 108 79**********************9988.89***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++lvg+kktLvfykgrapkg+kt+Wvmheyrle XP_021678997.1 109 AKTLVGMKKTLVFYKGRAPKGTKTNWVMHEYRLE 142 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MENNSMVSWN DEQMELPPGF RFHPTDEELI THYLSPKVLD NCFCARAIGE ADLNKCEPWD 60 LPKRAKMGEK EWYFFCVKDR KYPTGLRTNR ATDAGYWKAT GKDKEIYRAK TLVGMKKTLV 120 FYKGRAPKGT KTNWVMHEYR LEGKYSVYNL PKTAKNQWVI CRVFQKSSGG KKTHISGLAR 180 ISSYGNELRP SSLLPPLMDS SSHNSVTRDS GGDASYVTCF SKPMEHQKPK EDMVDSFNNT 240 SLLPSSSSSN ISPGSFLFSK TSLPSSFYSS QISPSFAKLQ YPDIVSMPEQ SIVRMLIENQ 300 GPNMTQYSKM ELSQDTGLSP DISSVVINPE LVRRSFEDQE DPSGSAGPVD LDCLWSYST

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MENNSMVSWN DEQMELPPGF RFHPTDEELI THYLSPKVLD NCFCARAIGE ADLNKCEPWD  60
LPKRAKMGEK EWYFFCVKDR KYPTGLRTNR ATDAGYWKAT GKDKEIYRAK TLVGMKKTLV  120
FYKGRAPKGT KTNWVMHEYR LEGKYSVYNL PKTAKNQWVI CRVFQKSSGG KKTHISGLAR  180
ISSYGNELRP SSLLPPLMDS SSHNSVTRDS GGDASYVTCF SKPMEHQKPK EDMVDSFNNT  240
SLLPSSSSSN ISPGSFLFSK TSLPSSFYSS QISPSFAKLQ YPDIVSMPEQ SIVRMLIENQ  300
GPNMTQYSKM ELSQDTGLSP DISSVVINPE LVRRSFEDQE DPSGSAGPVD LDCLWSYST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-120	NAC family protein