PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678830.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 309aa MW: 35027.2 Da PI: 9.3417

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678830.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.8	3.4e-19	46	134	2	86
trihelix 2 WtkqevlaLiearremeerlrrg......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt qe+l+Li+a++ ++er +++ k + +W++v +++++ g+ rs++qC++kw+nl ++ykki+e +++ s++s ++p + +e XP_021678830.1 46 WTIQETLTLITAKKLDDERRSKAsvpstsKPGELRWKWVENYCWANGCFRSQNQCNDKWDNLLRDYKKIREYQSR--SNDSDSFPSYWTME 134 ************88888886422222268899************************************9..678888**9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MSQPPTPTPI PQPLPPLPPP PQPPSLLATT TTTTSITNRE YRKGNWTIQE TLTLITAKKL 60 DDERRSKASV PSTSKPGELR WKWVENYCWA NGCFRSQNQC NDKWDNLLRD YKKIREYQSR 120 SNDSDSFPSY WTMERQQRKY YNLPSNMSLE VFEALNEVVQ RRHLNTQQNI ATTPQQQQQR 180 QLSVAVAASP TPETVREAPP EPAMDPTAVS EGSESSATES SDKLDTAAKR RKVGSIGASI 240 KHSASILAQT IRNCEEKKDK RHQQLMEFEQ RRLQLEETRN EVNRQGMASL AVAVTKLSSA 300 IQSLISDQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	229	260	KRRKVGSIGASIKHSASILAQTIRNCEEKKDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-48	Trihelix family protein