PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678800.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 566aa MW: 63001.9 Da PI: 4.4506

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678800.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.3	1.6e-35	131	222	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++l+ +isw ++g+sfvv+d+ efa+ +Lp+ Fkh+nf+SFvRQLn+YgF+k+++++ weF+++ F++g+++ll++ XP_021678800.1 131 FLSKTYDLVNDQTLDPIISWGNTGESFVVWDPVEFARVILPRNFKHNNFSSFVRQLNTYGFRKIDSDK---------WEFANEAFRRGERHLLKN 216 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+ks XP_021678800.1 217 IQRRKS 222 **98 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MNPEDQKSSK SPLKPSHSSS TTEPETTPSL LQPLMGSQLF PPGSLSMEDM SYSGSPLSAS 60 LPSPLVEFGA FSAIEQSVYS PSEMCEFGAN PLSERSPTRP SCGGYTADDS EENIGVPQPL 120 ASLQENPIPP FLSKTYDLVN DQTLDPIISW GNTGESFVVW DPVEFARVIL PRNFKHNNFS 180 SFVRQLNTYG FRKIDSDKWE FANEAFRRGE RHLLKNIQRR KSPQSQQVGS YTGPSTEVGK 240 SELESEVERL RKERSMMMQE VVELQQQQHG AVHHIEAVNQ RLQGAEQRQK QMISFLARLF 300 QNPSFLARLR QNKKQGDIGS SRMKKKFVKH KQHEPGQSES PVEGQIVNYR PEWTNFSSST 360 VVPTLNLVPV EQSPDYILRE MVEMGQDAEA MAFQIENVPP DEFAISDELA MAQGFIKSLQ 420 QFQEGTSNLG SEDPQITGKN VISTEQEVAP EYLDSFPEDL AVQKNLPEFS STGIEGIVKQ 480 EDVWSVGFDN QAGMSSSNQE LWGNLANYDV PELGSTCSFS DIWDLGSAQV AGSSGVQKWL 540 ADENLVDEPE SHAGQPKHDI SNNIDP

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MNPEDQKSSK SPLKPSHSSS TTEPETTPSL LQPLMGSQLF PPGSLSMEDM SYSGSPLSAS  60
LPSPLVEFGA FSAIEQSVYS PSEMCEFGAN PLSERSPTRP SCGGYTADDS EENIGVPQPL  120
ASLQENPIPP FLSKTYDLVN DQTLDPIISW GNTGESFVVW DPVEFARVIL PRNFKHNNFS  180
SFVRQLNTYG FRKIDSDKWE FANEAFRRGE RHLLKNIQRR KSPQSQQVGS YTGPSTEVGK  240
SELESEVERL RKERSMMMQE VVELQQQQHG AVHHIEAVNQ RLQGAEQRQK QMISFLARLF  300
QNPSFLARLR QNKKQGDIGS SRMKKKFVKH KQHEPGQSES PVEGQIVNYR PEWTNFSSST  360
VVPTLNLVPV EQSPDYILRE MVEMGQDAEA MAFQIENVPP DEFAISDELA MAQGFIKSLQ  420
QFQEGTSNLG SEDPQITGKN VISTEQEVAP EYLDSFPEDL AVQKNLPEFS STGIEGIVKQ  480
EDVWSVGFDN QAGMSSSNQE LWGNLANYDV PELGSTCSFS DIWDLGSAQV AGSSGVQKWL  540
ADENLVDEPE SHAGQPKHDI SNNIDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	5e-95	HSF family protein