PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678492.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 420aa MW: 48114.7 Da PI: 5.6756

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678492.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.9	2.2e-35	15	105	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+ye+++d+ +++++sws++g sfvv+++ efa+++Lp+yFkh+nf+SFvRQLn+YgF+k++ ++ weF++++F +g+++ll++ XP_021678492.1 15 FLIKTYEMVDDPLTNSVVSWSASGCSFVVWNPPEFAQDLLPNYFKHNNFSSFVRQLNTYGFRKIDPDQ---------WEFANEEFIRGQRHLLSN 100 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_021678492.1 101 IRRRK 105 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MDSSHGSSSN APAPFLIKTY EMVDDPLTNS VVSWSASGCS FVVWNPPEFA QDLLPNYFKH 60 NNFSSFVRQL NTYGFRKIDP DQWEFANEEF IRGQRHLLSN IRRRKPIHSH SMQNQVNYSP 120 LTKTEKSEYE EKIKRLKHEN TLLQLELQRH ETEKQVLECQ ILPLGERLRG MEHRQIQLGS 180 FLAQLVKKPG SASILMQQSE YHNKRRRLLE LDHFNGDYNM KEKHSLCSED STMKFELVEK 240 LDSSIKCIED FFYGAGEAFT QDMQDFALAS QPSPIHVREP STSSVDGETC SPISHQSSLH 300 SMDIPSSPEL PACINHVNSP KFPLEFPQFD ANFKPATSTS APLVEAVKES ELETTDSSTP 360 TGANDHFWEY FLTEAPGSSS TQELEPGFER RTSEERLWWS ANVINDLTKH MWHLAPAERT

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MDSSHGSSSN APAPFLIKTY EMVDDPLTNS VVSWSASGCS FVVWNPPEFA QDLLPNYFKH  60
NNFSSFVRQL NTYGFRKIDP DQWEFANEEF IRGQRHLLSN IRRRKPIHSH SMQNQVNYSP  120
LTKTEKSEYE EKIKRLKHEN TLLQLELQRH ETEKQVLECQ ILPLGERLRG MEHRQIQLGS  180
FLAQLVKKPG SASILMQQSE YHNKRRRLLE LDHFNGDYNM KEKHSLCSED STMKFELVEK  240
LDSSIKCIED FFYGAGEAFT QDMQDFALAS QPSPIHVREP STSSVDGETC SPISHQSSLH  300
SMDIPSSPEL PACINHVNSP KFPLEFPQFD ANFKPATSTS APLVEAVKES ELETTDSSTP  360
TGANDHFWEY FLTEAPGSSS TQELEPGFER RTSEERLWWS ANVINDLTKH MWHLAPAERT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	204	208	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	5e-81	HSF family protein