PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678272.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 737aa MW: 79603.6 Da PI: 6.0031

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678272.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.3	1.4e-32	314	371	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+k XP_021678272.1 314 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSH-EGHITEIIYKGAHNHPK 371 7**************************************.*************85 PP
2	WRKY	102.8	2e-32	528	586	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct agC+v+k+ver+++d k v++tYeg+Hnh+ XP_021678272.1 528 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHD 586 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 737 aa Download sequence
MAGIDDNVAI IGDWVPPSPS PRAFFSAILG DDISSRTIPE PSRDIRTEGL FLGSLEHNTT 60 GNTDKKDATQ TGGAQFTELA PFSEQKSSSR GGLVERMAAR AGFNAPRLNT ESIRSSDLSL 120 NPEIHSPYLT IPPGLSPTTL LDSPVFLSNS LAQPSPTTGK FSFVTNVNSK NSTVVSEPVD 180 RSKDNFFEDI NASSFAFKPV PDSGSSFFLG ATSKQSFPSI EVSVQSENSL QSRGVEPTKV 240 QSQNRNTLHF PVDFSRSVTE KDNGGNSVMT DRRFFDTVGG SAENSPPLDE QQDEGDQIAS 300 GDSMAGGGCG TPSEDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSHEGHITE 360 IIYKGAHNHP KPPPNRRAAI GSLNPVMDVQ LDVADQTGLQ SGTDNDPVWA STQKGTAAGT 420 PDWRHENVEV TSSASVGPEF GNAASSVQVQ NGNHFESGDA VDASSTFSND EDEDDQATHG 480 SVGCDGEGDE SESKRRKIET YPTDMGGATR AIREPRVVVQ TTSEVDILDD GYRWRKYGQK 540 VVKGNPNPRS YYKCTNAGCT VRKHVERASH DLKSVITTYE GKHNHDVPAA RNSSHVNSGT 600 SSTGTAQAGS AVQTHVHRPE PSQVHNSMSR FERSAAYGSF SFPGRQQLGP TPSFSFGMNQ 660 PGLANLAMAG LGAGQPRMTV MPVHPYLAQQ CPMNEMGFML PKGEPKVEPM SEPSLNLSNN 720 PSMYQQIMSR LPLGPQM

Sequence ? help Back to Top

Protein Sequence Length: 737 aa Download sequence

MAGIDDNVAI IGDWVPPSPS PRAFFSAILG DDISSRTIPE PSRDIRTEGL FLGSLEHNTT  60
GNTDKKDATQ TGGAQFTELA PFSEQKSSSR GGLVERMAAR AGFNAPRLNT ESIRSSDLSL  120
NPEIHSPYLT IPPGLSPTTL LDSPVFLSNS LAQPSPTTGK FSFVTNVNSK NSTVVSEPVD  180
RSKDNFFEDI NASSFAFKPV PDSGSSFFLG ATSKQSFPSI EVSVQSENSL QSRGVEPTKV  240
QSQNRNTLHF PVDFSRSVTE KDNGGNSVMT DRRFFDTVGG SAENSPPLDE QQDEGDQIAS  300
GDSMAGGGCG TPSEDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSHEGHITE  360
IIYKGAHNHP KPPPNRRAAI GSLNPVMDVQ LDVADQTGLQ SGTDNDPVWA STQKGTAAGT  420
PDWRHENVEV TSSASVGPEF GNAASSVQVQ NGNHFESGDA VDASSTFSND EDEDDQATHG  480
SVGCDGEGDE SESKRRKIET YPTDMGGATR AIREPRVVVQ TTSEVDILDD GYRWRKYGQK  540
VVKGNPNPRS YYKCTNAGCT VRKHVERASH DLKSVITTYE GKHNHDVPAA RNSSHVNSGT  600
SSTGTAQAGS AVQTHVHRPE PSQVHNSMSR FERSAAYGSF SFPGRQQLGP TPSFSFGMNQ  660
PGLANLAMAG LGAGQPRMTV MPVHPYLAQQ CPMNEMGFML PKGEPKVEPM SEPSLNLSNN  720
PSMYQQIMSR LPLGPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein