PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021678053.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | NAC | ||||||||
Protein Properties | Length: 257aa MW: 29107.6 Da PI: 8.0493 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 148.9 | 2.6e-46 | 12 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lp GfrF Pt+eelv++yL++k+egk+ e+++vi+ +diy++eP +Lp+ ++++++++w+fF++r++++a+g r++r+t+sgyWkatg+ XP_021678053.1 12 LPTGFRFYPTEEELVSFYLHNKLEGKRQEIHRVIPVIDIYNIEPCNLPMlageRCQGDTEQWFFFAPRQEREARGGRPSRTTASGYWKATGSPGY 106 699***************************99****************656776777888*********************************** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s++++++glkkt+vfykg+ap+g+kt+W m+eyr+ XP_021678053.1 107 VYSSDNRVIGLKKTMVFYKGKAPTGRKTKWKMNEYRA 143 ***********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MATTIRTRME ELPTGFRFYP TEEELVSFYL HNKLEGKRQE IHRVIPVIDI YNIEPCNLPM 60 LAGERCQGDT EQWFFFAPRQ EREARGGRPS RTTASGYWKA TGSPGYVYSS DNRVIGLKKT 120 MVFYKGKAPT GRKTKWKMNE YRAIEGVADS SSTAVPKLRH EFSLCRVYVI SGSFRAFDRR 180 PLEATARDAT ARDTQLLGDA ATAAAQDTRM VDNTSSPETS YSRGDHADAP GTEGSANWDT 240 VNGFVQPLWD WEQLNWP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 1e-104 | NAC family protein |