PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021677942.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 304aa MW: 34096.6 Da PI: 8.8317

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021677942.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.5	5.9e-41	152	229	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adl++ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+++ XP_021677942.1 152 RCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKSHQ 229 6**************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MLEYEWGNPS TMILNGDEPT PDPDQNRQIF DHYTAQSFND NLVPQPTTTL FHHPTTHQVN 60 SLYDPRAYTG ASYTTTHPSL LSLDPISNPV GVGPSYFIVP KNEEISRPAD YMARIGLNLG 120 GRTYFSSAED DFVNRLYRRS RPLEAGSSNA PRCQAEGCNA DLTHAKHYHR RHKVCEFHSK 180 ASTVIAAGLT QRFCQQCSRF HLLSEFDNGK RSCRKRLADH NRRRRKSHQI NQETHKSQPE 240 TARNSSSENL TRSPPDSGVH NSSSSVTVAV SPPRMFLDCF KQRPYQATAS SSSASSSSLF 300 FSSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	4e-87	SBP family protein