PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021677328.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GeBP

Protein Properties

Length: 404aa MW: 44894.4 Da PI: 4.3501

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021677328.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	120.1	1.1e-37	127	221	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfqrlw++eDei lLqG++d+++++g s ++d+ fy+++k++++++++k+qlveK+rrLKkK+++ +k++sgk+++f+++hdq +fe+s+kiW XP_021677328.1 127 LFQRLWTDEDEIELLQGFLDYTTQRG-SNHHDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKISSGKDFTFKSPHDQATFEISRKIW 220 79**********************.7799************************************************************** PP DUF573 97 g 97 XP_021677328.1 221 S 221 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MASEQDDTVF GHDLDDDDDE SSQSQDDDDD LENDDVMVEN DDVLADEEDE EDLNSVSPSI 60 SSPATVPVAV PSASAVTIAV PNGVDPPCAS VQSASDPKRQ RVETTLVIHQ QEEKKPQPQQ 120 MDESRRLFQR LWTDEDEIEL LQGFLDYTTQ RGSNHHDTAL FYDQIKSKLQ LDFNKNQLVE 180 KLRRLKKKYR NVLNKISSGK DFTFKSPHDQ ATFEISRKIW SSTGQIGVVD GGLDDEEGNP 240 NPNPNHPNFN DGEVKIEDQK PTPRSRKRSR SRPSAAAPSG VKVDDNRVSS EAFVVNNDSN 300 NNNITNNNTS LNVSVVIEET VRSCLLPLFK ELLSNVLAAG PCSGRGIGGL AMNAVPLTFG 360 GGEMMVDGKW RKQQILELEV YSKRLELVQD QIRAQLEELR SMGG

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MASEQDDTVF GHDLDDDDDE SSQSQDDDDD LENDDVMVEN DDVLADEEDE EDLNSVSPSI  60
SSPATVPVAV PSASAVTIAV PNGVDPPCAS VQSASDPKRQ RVETTLVIHQ QEEKKPQPQQ  120
MDESRRLFQR LWTDEDEIEL LQGFLDYTTQ RGSNHHDTAL FYDQIKSKLQ LDFNKNQLVE  180
KLRRLKKKYR NVLNKISSGK DFTFKSPHDQ ATFEISRKIW SSTGQIGVVD GGLDDEEGNP  240
NPNPNHPNFN DGEVKIEDQK PTPRSRKRSR SRPSAAAPSG VKVDDNRVSS EAFVVNNDSN  300
NNNITNNNTS LNVSVVIEET VRSCLLPLFK ELLSNVLAAG PCSGRGIGGL AMNAVPLTFG  360
GGEMMVDGKW RKQQILELEV YSKRLELVQD QIRAQLEELR SMGG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	267	272	KRSRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	3e-56	GeBP family protein