PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676784.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 708aa MW: 79010.6 Da PI: 8.219

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676784.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	77	98	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++C++ F ++ n++rHir+H XP_021676784.1 77 KCEKCSREFCSSINYRRHIRVH 98 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MPVAKLKASN NTDVMKTEKG NDSLDAFIRQ AIGKEPFLSF SRAGDSPVQW MQLLHALDQQ 60 DLPGWPLLTP LKVQMQKCEK CSREFCSSIN YRRHIRVHHR LKKLDKDCSK NRDLLRTFWD 120 KLSEDEAMEI LSFKDVTLEE VPGSSIVKSL MALVRKPGFS SLPQYCLRAG SALLDIIQGR 180 PSRFPLSSEE LLSILDDASE KTFMCGTAVS MQKYIFDGEA GKIGLETKNL VACTSFLVEQ 240 KLVKAWLADK DAESLRCQKL LVEEEEAAQR RQAELLERKR QKKLRQKEQK AKEHRQEEQA 300 DLNAWIDNTV EAVPSAEQSF PLIASDSGMN GLEALPDHVP SSFEPFQLLS MDEDVDLEIQ 360 TGSGSDPGTS RNVERQTVQR NSRRHLVVAH WHLSAKSQWN YVPNGFHANQ NSQAPKLSAM 420 QKHGNYRDSK SLLSINGNRK WSRKPKPDYS GDVLKTRVQK QAISLPDHNK KHEVLIGSIS 480 VALGNCSQQE GNNLDGARDD FLSEHQMPKK NNVQDKHNRP DSAHCSTNRS TIKLWRPVSR 540 NGIKGPILVE NGDRESQVDG ITGKGDDYIP PNGNCLCLCS VDDDHGGMGN SFPLLQGTPH 600 PGSLHFSCQA AKAFLAERWK EAIAAEHVKL ALSPDLKSSE CMEIQNECLV DVAQSSDTKK 660 CILGNVENQL VGVGVHESST TGASKAKLRT KPDKGVKLKY IPKQRTIS

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MPVAKLKASN NTDVMKTEKG NDSLDAFIRQ AIGKEPFLSF SRAGDSPVQW MQLLHALDQQ  60
DLPGWPLLTP LKVQMQKCEK CSREFCSSIN YRRHIRVHHR LKKLDKDCSK NRDLLRTFWD  120
KLSEDEAMEI LSFKDVTLEE VPGSSIVKSL MALVRKPGFS SLPQYCLRAG SALLDIIQGR  180
PSRFPLSSEE LLSILDDASE KTFMCGTAVS MQKYIFDGEA GKIGLETKNL VACTSFLVEQ  240
KLVKAWLADK DAESLRCQKL LVEEEEAAQR RQAELLERKR QKKLRQKEQK AKEHRQEEQA  300
DLNAWIDNTV EAVPSAEQSF PLIASDSGMN GLEALPDHVP SSFEPFQLLS MDEDVDLEIQ  360
TGSGSDPGTS RNVERQTVQR NSRRHLVVAH WHLSAKSQWN YVPNGFHANQ NSQAPKLSAM  420
QKHGNYRDSK SLLSINGNRK WSRKPKPDYS GDVLKTRVQK QAISLPDHNK KHEVLIGSIS  480
VALGNCSQQE GNNLDGARDD FLSEHQMPKK NNVQDKHNRP DSAHCSTNRS TIKLWRPVSR  540
NGIKGPILVE NGDRESQVDG ITGKGDDYIP PNGNCLCLCS VDDDHGGMGN SFPLLQGTPH  600
PGSLHFSCQA AKAFLAERWK EAIAAEHVKL ALSPDLKSSE CMEIQNECLV DVAQSSDTKK  660
CILGNVENQL VGVGVHESST TGASKAKLRT KPDKGVKLKY IPKQRTIS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	284	ERKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-142	C2H2 family protein