PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676680.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 563aa MW: 62640.7 Da PI: 4.3625

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676680.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.5	2.2e-52	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yLk+kv++k++++ + i+ vdiyk+ePwdLp k k+k+++ ewyfFs dkky +g+++nrat++gyWk+tgkd++v XP_021676680.1 10 LAPGFRFHPTDEELVRYYLKRKVTNKPFRF-DPIAVVDIYKTEPWDLPgKsKLKSRDLEWYFFSMLDKKYGNGSKTNRATEKGYWKTTGKDRPVR 103 579************************9.99***********6347777888********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLv++ grap+ge+t+Wvmheyrl XP_021676680.1 104 W-NSRAVGMKKTLVYHLGRAPRGERTNWVMHEYRL 137 9.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MARGDSATSL APGFRFHPTD EELVRYYLKR KVTNKPFRFD PIAVVDIYKT EPWDLPGKSK 60 LKSRDLEWYF FSMLDKKYGN GSKTNRATEK GYWKTTGKDR PVRWNSRAVG MKKTLVYHLG 120 RAPRGERTNW VMHEYRLTDE DLEKAGVVQD AFVLCRIFQK SGTGPKNGEQ YGAPFVEEEW 180 DDDEVVVVLP GEEMVMADEV ILGEDVHVET NDLEQNFEGG VVSENAALSV NYYHGETSNY 240 VEHSGNFSGD DQKPIIDQGE TQYGSDLPDD QNLFSLPGQY EIDTKSVRHE YIAESSNSAN 300 AADDNFLLDE PFLDAIDNPL SSEGLFLEAN DLSNPVEPDS TGDSTVFDMV DEYLNFFDAN 360 DDNLTFDPSE LGCENAVSDQ ASLPEKDVNG GTEEVPTAIQ KLLATHSNTD ASPSKQQMPV 420 ATKIDSDMKY PFMKQASHML GSIPAPSAFA SEFPIKDAAL QLNAAQPSSS IHVTARVIRI 480 ESITFSSSGT DWSFSKNGNV NVILSFGMLQ DNISTTPTNL VPLGSLFTGK TWSLMSRSWF 540 SLMCFWVLIV SVSIKIGIFV CSK

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MARGDSATSL APGFRFHPTD EELVRYYLKR KVTNKPFRFD PIAVVDIYKT EPWDLPGKSK  60
LKSRDLEWYF FSMLDKKYGN GSKTNRATEK GYWKTTGKDR PVRWNSRAVG MKKTLVYHLG  120
RAPRGERTNW VMHEYRLTDE DLEKAGVVQD AFVLCRIFQK SGTGPKNGEQ YGAPFVEEEW  180
DDDEVVVVLP GEEMVMADEV ILGEDVHVET NDLEQNFEGG VVSENAALSV NYYHGETSNY  240
VEHSGNFSGD DQKPIIDQGE TQYGSDLPDD QNLFSLPGQY EIDTKSVRHE YIAESSNSAN  300
AADDNFLLDE PFLDAIDNPL SSEGLFLEAN DLSNPVEPDS TGDSTVFDMV DEYLNFFDAN  360
DDNLTFDPSE LGCENAVSDQ ASLPEKDVNG GTEEVPTAIQ KLLATHSNTD ASPSKQQMPV  420
ATKIDSDMKY PFMKQASHML GSIPAPSAFA SEFPIKDAAL QLNAAQPSSS IHVTARVIRI  480
ESITFSSSGT DWSFSKNGNV NVILSFGMLQ DNISTTPTNL VPLGSLFTGK TWSLMSRSWF  540
SLMCFWVLIV SVSIKIGIFV CSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-173	NAC family protein