PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676457.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 405aa MW: 46252.3 Da PI: 4.6476

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676457.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.2	3.5e-35	14	105	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d+++++++sws++++sf+v+++ ef+k++Lp++Fkh+nf+SF+RQLn+YgF+k++ e+ weF ++ F +g+ +l+++ XP_021676457.1 14 FLSKTYEMVDDPSTDSVVSWSQSNKSFIVWNPPEFSKDLLPRFFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFGNEDFIRGQPHLMKN 99 9*************************************************************9998.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_021676457.1 100 IHRRKP 105 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MDESQGSSNS LPPFLSKTYE MVDDPSTDSV VSWSQSNKSF IVWNPPEFSK DLLPRFFKHN 60 NFSSFIRQLN TYGFRKIDPE QWEFGNEDFI RGQPHLMKNI HRRKPVHSHS MQNLQGQGSN 120 PLTDSERQSL KDYIERLEEE KQVLVLDLQR HEQEKQGFEM QMQALKEKLQ QMERKQQTMV 180 SFVARVLQKP GLALDLMSQL EPGHDRKRRL PRIGYLYDEA SIEDNQMVTC QALARENADS 240 NSVALSNVEQ FEQLESTLRF WESIVNDVQT NIQSNSTLEL DESTSCAESL AISCVQFSAD 300 NRPKSPAIDM NSEPAVASAT ESDPPKEPAT GTAPVAAGVN DVFWEQFLTE NPGSTDTQEV 360 QSERKDSGDR KNEIKPSEQG TFWWNMRNVN NLAEQMGHLT PAERT

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MDESQGSSNS LPPFLSKTYE MVDDPSTDSV VSWSQSNKSF IVWNPPEFSK DLLPRFFKHN  60
NFSSFIRQLN TYGFRKIDPE QWEFGNEDFI RGQPHLMKNI HRRKPVHSHS MQNLQGQGSN  120
PLTDSERQSL KDYIERLEEE KQVLVLDLQR HEQEKQGFEM QMQALKEKLQ QMERKQQTMV  180
SFVARVLQKP GLALDLMSQL EPGHDRKRRL PRIGYLYDEA SIEDNQMVTC QALARENADS  240
NSVALSNVEQ FEQLESTLRF WESIVNDVQT NIQSNSTLEL DESTSCAESL AISCVQFSAD  300
NRPKSPAIDM NSEPAVASAT ESDPPKEPAT GTAPVAAGVN DVFWEQFLTE NPGSTDTQEV  360
QSERKDSGDR KNEIKPSEQG TFWWNMRNVN NLAEQMGHLT PAERT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	210	DRKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	1e-146	HSF family protein