PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021676071.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 383aa MW: 42849.9 Da PI: 5.2126 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 134.1 | 9.4e-42 | 12 | 141 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 p+G+rFhPtd+elv ++L++k+ + + e i+e++++++ePw+L +k+k++++ +yfF++rd ky++++r+nr+tk+gyWk tgk ++v++ XP_021676071.1 12 PVGYRFHPTDQELVGHFLNRKILNPDDEK-MPIAELKVCDFEPWELSdkSKIKSNDQVYYFFCPRDYKYTHSRRSNRTTKAGYWKPTGKPRKVKD 105 89*********************999666.67**************8534888888899**********************************99 PP NAM 95 k.kgelvglkktLvfykgrapkge..ktdWvmheyr 127 +++ +g+k+tLvfy++++pk++ +t+W+mhey+ XP_021676071.1 106 IrTKKPIGTKRTLVFYEKEHPKAKavRTKWIMHEYE 141 757788**********88776654449********7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 383 aa Download sequence |
MATKIQPKRS NPVGYRFHPT DQELVGHFLN RKILNPDDEK MPIAELKVCD FEPWELSDKS 60 KIKSNDQVYY FFCPRDYKYT HSRRSNRTTK AGYWKPTGKP RKVKDIRTKK PIGTKRTLVF 120 YEKEHPKAKA VRTKWIMHEY EYIPQGNFLL CKLKAKSKGH ISNSEPKQLA SASESAMAVN 180 SSCDECAPSD NMGSNVEDHN LDEMTPVSAY DKGEQNCPVA LDFGNLNQSE VTANSACDES 240 ELGYHLASEP EDQNPNEMTA SSTNEECKLS CQVTSDIENH NSDKTSDILV SEQDEWSPHT 300 ATPDCGNHNA HDNTDMSTLS VASGLEIDAA EATFLEGLPT FFDAMKALLE PKDGLNSALF 360 SPGRAEEITP ALVPFCLVEQ VLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G24590.2 | 3e-41 | NAC family protein |