PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676061.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 690aa MW: 75953.3 Da PI: 6.5137

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676061.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.7	4.1e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_021676061.1 24 RERWTEEEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MDTYSSGEDL VIKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEAVAKG VPIGQALDID IPPPRPKRKP RNPYPRKTGV GPTPSQVAVK 120 DRNPLNSFSF THCKQALDLE KEPLPEKPIG DEKHANGKEN EDDSCSEVFT LLQESHCPAN 180 KNSVSTPEAL KKTCSFREFI PSLKEVVNQD ATNESYITIE RHGNQKLDKP DAKQTVEDNG 240 TNKAAKLESC PFHEKLVQGK TSNEFNNALP TDEMEAVQNY PRHVPVHVLG GSLGTCMQTP 300 PSDVSFQDSI FQPTGEVHGH PNLYSYPAAS TITEHQNSPP CAEGGFPSRQ MNSAPSMEAI 360 AAATVAAATA WWAAHGLLPF CAPLHAAFSC PPAATAVPPV DAGQVPAAKT ERKETTPENP 420 HLQDQQLDIE HSEALQAQNS ASKSPTLSLS DSDESGGPKQ NTVSKATDHE MAATAPEIHD 480 SSKMKNRKQV DRSSCGSNTS SSSEVETDAP EKLEKEKEES KEVDTNHLAT ESSSRRSRSS 540 SNMSDSWKEV SEEGRLAFQA LFSREVLPQS FSPPHDLKGE AHQKDNVEDK QNTDEKDGNA 600 SLLNLTSKIR GSCTSHREVE KNALPRCEYS GEDGLLTIGL GHGKLKARRT GFKPYKRCSV 660 EAKENRVVAI GSQYEEKGSK RIRIDGEASI

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MDTYSSGEDL VIKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEAVAKG VPIGQALDID IPPPRPKRKP RNPYPRKTGV GPTPSQVAVK  120
DRNPLNSFSF THCKQALDLE KEPLPEKPIG DEKHANGKEN EDDSCSEVFT LLQESHCPAN  180
KNSVSTPEAL KKTCSFREFI PSLKEVVNQD ATNESYITIE RHGNQKLDKP DAKQTVEDNG  240
TNKAAKLESC PFHEKLVQGK TSNEFNNALP TDEMEAVQNY PRHVPVHVLG GSLGTCMQTP  300
PSDVSFQDSI FQPTGEVHGH PNLYSYPAAS TITEHQNSPP CAEGGFPSRQ MNSAPSMEAI  360
AAATVAAATA WWAAHGLLPF CAPLHAAFSC PPAATAVPPV DAGQVPAAKT ERKETTPENP  420
HLQDQQLDIE HSEALQAQNS ASKSPTLSLS DSDESGGPKQ NTVSKATDHE MAATAPEIHD  480
SSKMKNRKQV DRSSCGSNTS SSSEVETDAP EKLEKEKEES KEVDTNHLAT ESSSRRSRSS  540
SNMSDSWKEV SEEGRLAFQA LFSREVLPQS FSPPHDLKGE AHQKDNVEDK QNTDEKDGNA  600
SLLNLTSKIR GSCTSHREVE KNALPRCEYS GEDGLLTIGL GHGKLKARRT GFKPYKRCSV  660
EAKENRVVAI GSQYEEKGSK RIRIDGEASI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	101	RPKRKPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	5e-89	MYB_related family protein