PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021675948.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 788aa    MW: 87856 Da    PI: 5.8164
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021675948.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.33.5e-2086141156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e+lF+++++p+ ++r +L+++lgL+ rq+k+WFqNrR+++k
  XP_021675948.1  86 KKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQELGLKPRQIKFWFQNRRTQMK 141
                     688899***********************************************998 PP
2START1525e-482835072206
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS..............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv.............dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 
                     la +  +elvk+ +a+ep+W +    eng+evl  +e +k              ++ ea r+s+vv+m++ +lv  +ld + +W e ++    +a
  XP_021675948.1 283 LAMSSIDELVKMCQATEPLWIRNN--ENGKEVLNLEEHAKMfpwplnlkqhsneSRNEATRDSAVVIMNSITLVDAFLDAN-KWMELFPsivaRA 374
                     5667899***************99..**********99999************999*************************.******99999** PP

                     EEEEEECTT.....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEE CS
           START  80 etlevissg.....galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwv 167
                     +t++ i+sg     g l+lm+aelq+lsplvp R+ +f+Ry++q  ++g w+ivd  +d   ++  ++ +   +++pSg++i++++ng+s+vtwv
  XP_021675948.1 375 KTVQIITSGvpcasGSLHLMYAELQVLSPLVPtREAYFLRYCQQnVEEGNWAIVDFPIDGFHDNI-QPRFPLYRRRPSGCVIQDMPNGYSRVTWV 468
                     ********************************************99*************999988.666666669******************** PP

                     E-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 168 ehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     e+++ +++ +h+++ ++v+sg+a+ga +w+  lqrqce+
  XP_021675948.1 469 EQAEIEEKPVHQIFSQFVSSGMAFGAHRWLGVLQRQCER 507
                     *************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 788 aa     Download sequence    
MYGDCQILSN MGANVVSSET LFSSAMGNPN FDFLPNMPFH SFPSIIPKEE SGMMREKEEM  60
ESGSGSEQVE EKSGNEQEST EKPLKKKRYH RHTARQIQEM EALFKECPHP DDKQRMKLSQ  120
ELGLKPRQIK FWFQNRRTQM KAQQDRSDNI ILRTENETLK NDNYLLQAEL RNLICPSCGG  180
PAMIGGISFE ELRMENARLR DELERVCCIA SRYAGRPIQA MQPTSTLVLP SLDLDMNIYS  240
RHFPDSLGSC TEMMPMLMLP GTSSFAEAGL VLMEEEKTLA MELAMSSIDE LVKMCQATEP  300
LWIRNNENGK EVLNLEEHAK MFPWPLNLKQ HSNESRNEAT RDSAVVIMNS ITLVDAFLDA  360
NKWMELFPSI VARAKTVQII TSGVPCASGS LHLMYAELQV LSPLVPTREA YFLRYCQQNV  420
EEGNWAIVDF PIDGFHDNIQ PRFPLYRRRP SGCVIQDMPN GYSRVTWVEQ AEIEEKPVHQ  480
IFSQFVSSGM AFGAHRWLGV LQRQCERVAS LMARNISDLG VIPSPEARKN LMRLAQRMIR  540
TFSVNVSTCG GQSWTALSDS CNDTVRITTR KITEPGQPNG VILSAVSTTW LPFPHYHVFE  600
LLRDEHRRSQ LDVLSNGNAL HEVAHIANGS HPGNCISLLR INVASNSSQN VELMLQESCT  660
DQSGSLVVYT TVNVDSIQLA MSGEDPSCIP LLPLGFVIVP VESTCNSNTV NEGNSIQSLQ  720
EGNCTNSGCL LTVGLQVLAS TIPSAKLNLS SVNAINNHLR NTVHQITSAL STSAASCPEH  780
NAAPQGKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein