PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021673738.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 274aa MW: 29786.8 Da PI: 10.2336

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021673738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	77.8	2.9e-24	80	191	5	109
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...........ssssaseceaesssssasnsssg 88 k ++++h kv+gR+ RvR++a+caar+F+L++eLG+ + ++tieWLl ++ + t ++++ +s s+ s + XP_021673738.1 80 KPHSKDRHKKVEGRGTRVRIPADCAARIFQLTRELGHRTSGQTIEWLLDHVPASHFPTATTaaatssdniavA-------TNSTLCVSPSETS-N 166 78899*********************************************99998888777444333332220.......2222222222111.1 PP TCP 89 ...kaaksaa.kskksqksaasaln 109 ++a+s + ++kk + s++s+ XP_021673738.1 167 aacNSASSLPrSKKKISGSKKSNTP 191 1231111111122222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MNKNVLIIKP QSPSKILLLR TPLTLTMVSS SQEKPIDPSQ FFTNFSATQQ LLPPNTTTTT 60 TTPATVTPRK TQELLLSLNK PHSKDRHKKV EGRGTRVRIP ADCAARIFQL TRELGHRTSG 120 QTIEWLLDHV PASHFPTATT AAATSSDNIA VATNSTLCVS PSETSNAACN SASSLPRSKK 180 KISGSKKSNT PLHDSLNSRA SLSGGFFPTS NSLYASTLSA PTREETEIAR IPMAVVEPER 240 KKEDLRGEFD LFPGADGSLP NMSFTSLLMQ LERE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08330.1	2e-21	TCP family protein