PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021673662.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 733aa MW: 80190.2 Da PI: 7.051

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021673662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.1	1.3e-31	268	325	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkk+e+s d++++ei+Y+g Hnh+k XP_021673662.1 268 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCEVKKKIEHSY-DGQIMEIIYKGAHNHPK 325 7**************************************.*************85 PP
2	WRKY	101.9	3.8e-32	486	544	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+agC+v+k+ver++++ k+v++tYeg+Hnhe XP_021673662.1 486 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCSVRKHVERASHNLKYVITTYEGKHNHE 544 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 733 aa Download sequence
MDPNPPPQQP PSKTLLSSSV VRIDNFTKRN CTISSDEASE NAIRGSIAQR RAAKNGFKAV 60 SINTARFRTT SPLASPAAAG IRSPCITIPP GISPTALLDS PIMLPNSQPS PTTGTFPLVH 120 LNFESTMLNT VIPADMDKGS NAGSFSFKPH KDPGPVPDFA TLENQGNNVD YQAVVSMRTS 180 SAFEFPVEFP KEATTESCAG DSAPDMKISN GMIANSNFSD VQMGHTDVAS NQTSIQMEPI 240 PGENVRTHHA QEEEKRTLPA TGVGRNSEDG YNWRKYGQKQ VKGSEYPRSY YKCTHPNCEV 300 KKKIEHSYDG QIMEIIYKGA HNHPKPQPNC RAQVGSASLF DEMPEMVEGR ETCSKVEVGS 360 VWKNSKPVPK DVKVGSDWKA NGMERTSSTS VVTELSDLLS ATHGKSTGTF KSAGTPELSS 420 TLVSNDDDDD DGATQGSISL GVDADIEESE SKRRRIESCL VETSLTSRAV REPRVVVQIE 480 SEIDILDDGY RWRKYGQKVV KGNPNPRSYY KCTTAGCSVR KHVERASHNL KYVITTYEGK 540 HNHEVPAARN SNTATNTQPP LASAGNTNRS KPETQIQDFG PGFDRKPVFD NDYLRHSFGG 600 SFCNEMKLGA SSIYPLKYPT FQHTMPYGSF EINCSATHHS GSIASFVPDF PISLPSSVHA 660 SANLSLAGVD FNYNRKPIGE SQPLLSRQQL VKPKQEQRDD NLYDAGQSSI DHVNASRSSS 720 SVVYQRIMEN FPS

Sequence ? help Back to Top

Protein Sequence Length: 733 aa Download sequence

MDPNPPPQQP PSKTLLSSSV VRIDNFTKRN CTISSDEASE NAIRGSIAQR RAAKNGFKAV  60
SINTARFRTT SPLASPAAAG IRSPCITIPP GISPTALLDS PIMLPNSQPS PTTGTFPLVH  120
LNFESTMLNT VIPADMDKGS NAGSFSFKPH KDPGPVPDFA TLENQGNNVD YQAVVSMRTS  180
SAFEFPVEFP KEATTESCAG DSAPDMKISN GMIANSNFSD VQMGHTDVAS NQTSIQMEPI  240
PGENVRTHHA QEEEKRTLPA TGVGRNSEDG YNWRKYGQKQ VKGSEYPRSY YKCTHPNCEV  300
KKKIEHSYDG QIMEIIYKGA HNHPKPQPNC RAQVGSASLF DEMPEMVEGR ETCSKVEVGS  360
VWKNSKPVPK DVKVGSDWKA NGMERTSSTS VVTELSDLLS ATHGKSTGTF KSAGTPELSS  420
TLVSNDDDDD DGATQGSISL GVDADIEESE SKRRRIESCL VETSLTSRAV REPRVVVQIE  480
SEIDILDDGY RWRKYGQKVV KGNPNPRSYY KCTTAGCSVR KHVERASHNL KYVITTYEGK  540
HNHEVPAARN SNTATNTQPP LASAGNTNRS KPETQIQDFG PGFDRKPVFD NDYLRHSFGG  600
SFCNEMKLGA SSIYPLKYPT FQHTMPYGSF EINCSATHHS GSIASFVPDF PISLPSSVHA  660
SANLSLAGVD FNYNRKPIGE SQPLLSRQQL VKPKQEQRDD NLYDAGQSSI DHVNASRSSS  720
SVVYQRIMEN FPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	452	456	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-100	WRKY family protein