PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021673177.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 333aa    MW: 37213.7 Da    PI: 8.4563
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021673177.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.74.9e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd  lv +++++G+g+W++++   g+ R+ k+c++rw +yl
   XP_021673177.1 14 KGPWTPEEDIMLVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding461.3e-1467110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++T  E++ ++++ ++lG++ W++Ia++++  Rt++++k++w++
   XP_021673177.1  67 RGNFTDHEEKMIIHLQALLGNR-WAAIASYLP-ERTDNDIKNYWNT 110
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MGRLPCCDKL GVKKGPWTPE EDIMLVSYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TDHEEKMIIH LQALLGNRWA AIASYLPERT DNDIKNYWNT RLKKKLKKLQ  120
TTGHEGDSKN ELSSSSTVSK PISRGQWERR LQTDIHTARQ ALYEALSPEK KSSLFTELKH  180
SSGGHFFARP ASNYASSTEN IAKLLKGWMR NGPKKQAQTN SSAATQNSFN NIAGTTDSIC  240
SEGTGPSKGD KNGIELAQAF ESLFGFESLD SSISDFSHTM STDEASLFQD ESKPYSSDQM  300
PPLSLLEKWL LDEGALQGKN YLGEVTLDEN NLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.11e-106MYB family protein