PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021672495.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 225aa MW: 25281.4 Da PI: 8.0627

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021672495.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.2	3.3e-17	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+d+++ +G g+W++ ++ g++R++k+c++rw +yl XP_021672495.1 13 KGAWSKQEDQKLIDYITIHGEGCWRSLPKAAGLHRCGKSCRLRWINYL 60 79********************************************97 PP
2	Myb_DNA-binding	52.2	1.4e-16	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_021672495.1 66 RGNFAQDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSHL 111 8999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MRKPCCDKQG NNKGAWSKQE DQKLIDYITI HGEGCWRSLP KAAGLHRCGK SCRLRWINYL 60 RPDIKRGNFA QDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH LRKKLINMGI 120 DPNNHRLNQI LPRPQPERVS SPIDEDTCKT KKSTGDYIDR VSDAASSSLE ENETSAGSSD 180 INLDLTIAVP SSAHTSTSET RPENCDTAAT SEVRSETLPT LLLFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	5e-75	MYB family protein