PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021672420.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 487aa MW: 55066.3 Da PI: 5.9208

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021672420.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36	1.6e-11	437	485	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW+ eE++ l ++v+++G g+Wk+I Rt+ ++k++w++ XP_021672420.1 437 KRWSVEEEDALREGVQLFGRGNWKAILDFKRdifYDRTEVDLKDKWRNM 485 69*********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MDSEEMDPDI VLWIIEFLAR QDSVSKLVLN RILTNTHIPI LATPRLKKTL ALRAIQDEIA 60 DGSVSSEIIL ESLEIIEQLD QKKGFKIPDS MKLAYCAVAV DCTVKHLGVV GSKRKRDPEM 120 FFEAVKTIWS ERVDKLEFLK KSELVTDELR EFKEEMEAAL WDSNACGRLL ERATRNEALR 180 LVMDYLKEAL DEMGRPFLEL LARAERERKE KEMVEKEKNA DKVGVKASRE PEVGVAGGSA 240 RKETQDNDML HTSNDLKGSG GIMDSEKVVM NIPTPEVKIV KEALKSSSME LKALLNDPLP 300 NALHLSEALM PERKALNKEI LVENQVGKGV DVPNPSVNVV VSIETPNTSV TQTIESIQTM 360 KNGAGIQICN NQIVVSKHTL MEKNSTARTY EWDDSIDGSP EGASGMNRFQ LAKPRTKVVS 420 PLKEYKIPKF AGRRKVKRWS VEEEDALREG VQLFGRGNWK AILDFKRDIF YDRTEVDLKD 480 KWRNMTK

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MDSEEMDPDI VLWIIEFLAR QDSVSKLVLN RILTNTHIPI LATPRLKKTL ALRAIQDEIA  60
DGSVSSEIIL ESLEIIEQLD QKKGFKIPDS MKLAYCAVAV DCTVKHLGVV GSKRKRDPEM  120
FFEAVKTIWS ERVDKLEFLK KSELVTDELR EFKEEMEAAL WDSNACGRLL ERATRNEALR  180
LVMDYLKEAL DEMGRPFLEL LARAERERKE KEMVEKEKNA DKVGVKASRE PEVGVAGGSA  240
RKETQDNDML HTSNDLKGSG GIMDSEKVVM NIPTPEVKIV KEALKSSSME LKALLNDPLP  300
NALHLSEALM PERKALNKEI LVENQVGKGV DVPNPSVNVV VSIETPNTSV TQTIESIQTM  360
KNGAGIQICN NQIVVSKHTL MEKNSTARTY EWDDSIDGSP EGASGMNRFQ LAKPRTKVVS  420
PLKEYKIPKF AGRRKVKRWS VEEEDALREG VQLFGRGNWK AILDFKRDIF YDRTEVDLKD  480
KWRNMTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	3e-13	MYB_related family protein