PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021672419.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB_related | ||||||||
Protein Properties | Length: 487aa MW: 55066.3 Da PI: 5.9208 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36 | 1.6e-11 | 437 | 485 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW+ eE++ l ++v+++G g+Wk+I Rt+ ++k++w++ XP_021672419.1 437 KRWSVEEEDALREGVQLFGRGNWKAILDFKRdifYDRTEVDLKDKWRNM 485 69*********************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 487 aa Download sequence |
MDSEEMDPDI VLWIIEFLAR QDSVSKLVLN RILTNTHIPI LATPRLKKTL ALRAIQDEIA 60 DGSVSSEIIL ESLEIIEQLD QKKGFKIPDS MKLAYCAVAV DCTVKHLGVV GSKRKRDPEM 120 FFEAVKTIWS ERVDKLEFLK KSELVTDELR EFKEEMEAAL WDSNACGRLL ERATRNEALR 180 LVMDYLKEAL DEMGRPFLEL LARAERERKE KEMVEKEKNA DKVGVKASRE PEVGVAGGSA 240 RKETQDNDML HTSNDLKGSG GIMDSEKVVM NIPTPEVKIV KEALKSSSME LKALLNDPLP 300 NALHLSEALM PERKALNKEI LVENQVGKGV DVPNPSVNVV VSIETPNTSV TQTIESIQTM 360 KNGAGIQICN NQIVVSKHTL MEKNSTARTY EWDDSIDGSP EGASGMNRFQ LAKPRTKVVS 420 PLKEYKIPKF AGRRKVKRWS VEEEDALREG VQLFGRGNWK AILDFKRDIF YDRTEVDLKD 480 KWRNMTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58340.2 | 3e-13 | MYB_related family protein |